Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq35382 127 2e-24 >seq35382 Length=6325 Score = 127 bits (140), Expect = 2e-24 Identities = 206/294 (70%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874 |||| ||| |||| ||||| | |||||||||| ||||| | ||||| ||| ||| Sbjct 3588 GAAACTGCCCACACCCACGACGACCTGTGGAACGCAGCTCAGCTGCAGCTGGTGAAGGAG 3647 Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934 | |||||||| || |||||||||||||| |||||||| | || ||| | || Sbjct 3648 GCCAAGATGCACGGGTTCCTGCGCATGTATTGGGCGAAGAAAATACTCGAGTGGAC-GAA 3706 Query 37935 GATGCTC-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGG 37993 | || | || |||||| | ||||| ||||| || ||| |||||| |||| || Sbjct 3707 AACGCCCGAGGAAGCGCTCGAAACGGCCATCTATCTGAACGATCGCTACAGCCTGGATGG 3766 Query 37994 GCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGC 38053 ||| ||||| ||||| |||||||| || ||||||| || ||| | || ||| | Sbjct 3767 GCGCGATCCGAACGGATACGTCGGGTGCATGTGGTCGATCGCCGGCATCCATGATCAGGG 3826 Query 38054 CTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 ||| ||| |||| ||||| ||||| |||||||||||| |||| || Sbjct 3827 ATGGAAGGAGCGGGAAATTTTTGGCAAAATTCGCTACATGAACTACGACGGCTG 3880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396859516623850