Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq41190 114 3e-20
seq20716 89.7 1e-12
>seq41190
Length=4563
Score = 114 bits (126), Expect = 3e-20
Identities = 230/341 (67%), Gaps = 0/341 (0%)
Strand=Plus/Plus
Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476
|| ||||| |||| || | ||||| || ||| |||| || |||| ||||| |||
Sbjct 822 CAGGCGTCCACGTCCGAACTCTATGGTAAGGTGGTCGAAACGCCGCAGAACGAAAAAACT 881
Query 72477 CCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAA 72536
|| || ||||| || || |||| | |||||| |||||| || ||||| |
Sbjct 882 CCATTCTATCCGCGCTCGCCGTACGCTTGTGCAAAAATGTACGGCTACTGGATAGTGATC 941
Query 72537 AATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGT 72596
|||||||| ||| |||| ||||||| || |||||| ||| ||||| ||||||
Sbjct 942 AATTACCGCGAGGCGTACAACATGTTTGCCTGCAACGGTATTCTCTTCAACCACGAGTCG 1001
Query 72597 CCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTTC 72656
||| | || | | || ||||| || |||||||| ||| ||||| ||||
Sbjct 1002 CCCCGGCGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTGGCGAAGATTTCG 1061
Query 72657 AATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATAT 72716
|| | | ||| | | ||||||||| | ||| | || | || ||||| |
Sbjct 1062 CTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGCGTGACTGGGGCCAC 1121
Query 72717 GCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACA 72757
|| || || ||||| |||||||||||||||||| |||| ||
Sbjct 1122 GCAAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCA 1162
>seq20716
Length=12815
Score = 89.7 bits (98), Expect = 1e-12
Identities = 110/149 (74%), Gaps = 6/149 (4%)
Strand=Plus/Plus
Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGG 288384
|| || || ||||||||||||||||| || |||| ||||| || || || ||||||
Sbjct 14 TGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGCGGGATACCCTCCTTGTCCTGG 70
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444
|| ||||| ||||| || || || | ||| | || || || || || || |||||
Sbjct 71 ATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTA 130
Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || |||||||| ||||||||
Sbjct 131 CCCGTGAGGGTTTTGACGAAGATCTGCAT 159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179020732050150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |