Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq16794 114 2e-20 seq10535 111 2e-19 seq41190 100 3e-16 >seq16794 Length=6728 Score = 114 bits (126), Expect = 2e-20 Identities = 204/292 (70%), Gaps = 8/292 (3%) Strand=Plus/Plus Query 171881 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 171939 |||||||||||||||| | ||| ||| ||||| ||| | || ||||| || || || Sbjct 367 GTGAAGATGTACCTCG-GGCTGGCGCTATCCTTGCCGCCCGTCAGCCGCGTACCGAACTG 425 Query 171940 ACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 171999 ||| | ||| | || || ||||| ||||| |||| ||||| | |||| |||| Sbjct 426 ACCGCCCGGGTACAGCAGGTTGATGTTGTTACTGCCCACGTAGTTCTGCGCCAGGTTGAT 485 Query 172000 AATCGTATCCGCG-AGGGAGACT--TCACCGTGATGGTAGGCCGACTTGTCCGCGACATA 172056 ||||| || | || | |||| || ||||| |||||||| ||| | ||||| || | Sbjct 486 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGA 542 Query 172057 CGCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 172116 |||||| ||| |||||||||| ||| |||| ||| | |||||||| ||| Sbjct 543 GCCCGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCACGTGAACAG 602 Query 172117 GACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 172168 ||||| | ||| ||||| || ||||| |||| || ||| |||||| Sbjct 603 CACCTTCCGCTGGCCCGGCTTCAGCCCGTCCAGCATGCACGGGATCGAACGC 654 >seq10535 Length=3010 Score = 111 bits (122), Expect = 2e-19 Identities = 248/368 (67%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| || |||||||| || ||||| || ||||||||||| ||| || Sbjct 211 GCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGTCAGCCCC 270 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || || |||||||||| |||||| || || ||| || ||||||||| Sbjct 271 GGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGATA 330 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG-GAGCGCGACTTTGTGTCAAA 126225 ||||| || |||||||||| | |||||| ||||| ||| | ||| || | Sbjct 331 CCCTCAACTGCAGCGAACGCAACCACACGCTCCCCAAAGTTAGC-CTTCTTGCTGGAGAT 389 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| |||| |||||| | ||||| |||| | ||||| | || | |||||| | || Sbjct 390 CCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAA 449 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || | || | || || || |||||| | || || || || || |||| Sbjct 450 CAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTC 509 Query 126346 GCCGTGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 126403 || ||| || ||| || ||| |||| || ||||||| |||| || || | | | Sbjct 510 GCTGTGCAC--GTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACC 567 Query 126404 TGTACCTC 126411 || ||||| Sbjct 568 TGCACCTC 575 >seq41190 Length=4563 Score = 100 bits (110), Expect = 3e-16 Identities = 207/300 (69%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 8637 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTC 8696 ||| | |||| |||||||| || | || | ||||| ||| ||||||||||||| Sbjct 930 TGGATAGTGATCAATTACCGCGAGGCGTACAACATGTTTGCCTGCAACGGTATTCTCTTC 989 Query 8697 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTA 8754 ||||||||||| ||||| || || | | || |||||| || ||||| || | ||| Sbjct 990 AACCACGAGTCGCCCCGGCGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTG 1049 Query 8755 TCAAACAAATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGA 8814 | || | ||| | | || || ||||| | | || | || || ||| | | || Sbjct 1050 GCGAAGATTTCG-CTC-GGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGC 1107 Query 8815 GGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAG 8874 | |||||||| ||||| || ||||| || ||||| |||||| | | | || | ||||| Sbjct 1108 GTGACTGGGGCCACGCAAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGC-AGAAG 1166 Query 8875 -AGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933 || |||| || | ||| |||||||||| || || || || || | || || || ||| Sbjct 1167 CAGCCGGAAGATTTCGTCATCGCGACGGGCGAAACGCATTCGGTGCGAGAATTTGTCGAG 1226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597040549379000