Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq13705 118 8e-22 seq39285 91.5 1e-13 seq11541 87.8 1e-12 >seq13705 Length=7852 Score = 118 bits (130), Expect = 8e-22 Identities = 325/492 (66%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 || ||||||||||| |||||||| | ||| ||| ||||||| ||| || || ||||| Sbjct 608 GCTGGGTTCGGTGTTACGGCCGGTGCCCACCGGTTGTGGACACACCGGGCGTATAAGGCG 549 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| || || | |||| | |||| |||| |||| || ||||||| | | Sbjct 548 AAGCTACCGCTCCGGATCATCCTCATGTGCTGCTACTCGATGGCCGGCCAGAACAGCCTG 489 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| ||||| | | |||||||||||||| || ||| || || || Sbjct 488 TTCGATTGGGTGCGTGATCATCGCATCCACCACAAGTACTCGGAGACGGACGCGGATCCG 429 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||| | ||| |||| |||| | | ||||||| || ||||| |||| ||| || Sbjct 428 CACAACTCGAACCGGGGCTTCTTCTACGCGCACGTCGGCTGGCTGCTGATCCGGAAGCAC 369 Query 108580 CCCGACGTG-ATCTCGGCCGGTCGAAAAATGGACATGACGGACATATACTCCGATCCGGT 108638 || || ||| ||| | ||||| || |||||| ||||| | |||||||||| Sbjct 368 CCGGA-GTGCATCAAGAAGGGTCGGCTGATCGACATGTCGGACGTGCTGGCCGATCCGGT 310 Query 108639 GGTAGTGTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGTTATACC 108698 | || ||| |||||||| | || || || || || || | |||| Sbjct 309 CATCCAGTTCCACCAGCGTTACTTTATGGCGCTGAAGATCCTGTTCACGTTCATCGTACC 250 Query 108699 GGTGTGGGTGCCGGTCGCGTGTT--GGGGGGAGACGTTCGCGGCGGCGTTCCTGTCTCAG 108756 | || | || || || |||| ||| ||| || || | | ||||| | | Sbjct 249 GTCGTTCATACC-GTGGC-TGTTCCTGGGCGAGCCGCTCTATCTGTCCTTCCTCGCGAAC 192 Query 108757 GCCGTTCTGAGGTACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCAC 108816 | ||| |||||| || || || ||||||||||||||||| || ||||| ||| Sbjct 191 TGTCTGCTGCGGTACGTGCTGACGCTGAACTTTACGTGGCTGGTGAACAGTGCGGCTCAC 132 Query 108817 ATGTACGGCGAC 108828 || |||||| || Sbjct 131 ATCTACGGCAAC 120 Score = 98.7 bits (108), Expect = 8e-16 Identities = 171/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||| | || || || ||| ||||| ||| | |||||||| Sbjct 6443 GCCGGGTTCGGCGTGACCGGTGGGGTGCACCGGCTGTGGTGCCATCGGTCGTACAAGGCG 6384 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| || | | |||| | |||| |||| | || || |||||||| ||| Sbjct 6383 AAGCTACCGCTCCGCATCATCCTCATGTGCTGCTACTCGATAGCCGGCCAGAACACGATC 6324 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518 | ||||| | || || | |||||||||||||||| || ||| |||| || || Sbjct 6323 TACGACTGGGTCCGGGACCATCGCATTCACCACAAGTACTCGGAAACGGACGGT-GATCC 6265 Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578 ||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| | Sbjct 6264 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAGCA 6205 Query 108579 CCCCGA 108584 ||| || Sbjct 6204 CCCGGA 6199 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | ||||| |||||||||||||||||||| |||||||| | ||||||||||| | Sbjct 3504 TGGCCATGGGCGAAGGATGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGG 3445 Query 108941 CCGAGTTGGGGAACGACT 108958 ||||| |||| ||| ||| Sbjct 3444 CCGAGCTGGGCAACTACT 3427 >seq39285 Length=6951 Score = 91.5 bits (100), Expect = 1e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929 |||||| |||| || ||||||| |||||||||||||| |||||||||||||| | || Sbjct 3925 GGTGGCTTCGTTCGCATTCGGCGAAGGATGGCACAACTATCACCACGTGTTCCCGTGGGA 3866 Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||||| | |||||| |||| ||| || Sbjct 3865 CTACAAGACGGCCGAGCTGGGCAACTAC 3838 >seq11541 Length=1875 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | ||||| |||||||||||||||||||| |||||||| | ||||||||||| | Sbjct 102 TGGCCATGGGCGAAGGATGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGG 161 Query 108941 CCGAGTTGGGGAACGACT 108958 ||||| |||| ||| ||| Sbjct 162 CCGAGCTGGGCAACTACT 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381577729012200