Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq13705 118 8e-22
seq39285 91.5 1e-13
seq11541 87.8 1e-12
>seq13705
Length=7852
Score = 118 bits (130), Expect = 8e-22
Identities = 325/492 (66%), Gaps = 6/492 (1%)
Strand=Plus/Minus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
|| ||||||||||| |||||||| | ||| ||| ||||||| ||| || || |||||
Sbjct 608 GCTGGGTTCGGTGTTACGGCCGGTGCCCACCGGTTGTGGACACACCGGGCGTATAAGGCG 549
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||| || || | |||| | |||| |||| |||| || ||||||| | |
Sbjct 548 AAGCTACCGCTCCGGATCATCCTCATGTGCTGCTACTCGATGGCCGGCCAGAACAGCCTG 489
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519
| ||||||| ||||| | | |||||||||||||| || ||| || || ||
Sbjct 488 TTCGATTGGGTGCGTGATCATCGCATCCACCACAAGTACTCGGAGACGGACGCGGATCCG 429
Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579
|||||| | ||| |||| |||| | | ||||||| || ||||| |||| ||| ||
Sbjct 428 CACAACTCGAACCGGGGCTTCTTCTACGCGCACGTCGGCTGGCTGCTGATCCGGAAGCAC 369
Query 108580 CCCGACGTG-ATCTCGGCCGGTCGAAAAATGGACATGACGGACATATACTCCGATCCGGT 108638
|| || ||| ||| | ||||| || |||||| ||||| | ||||||||||
Sbjct 368 CCGGA-GTGCATCAAGAAGGGTCGGCTGATCGACATGTCGGACGTGCTGGCCGATCCGGT 310
Query 108639 GGTAGTGTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGTTATACC 108698
| || ||| |||||||| | || || || || || || | ||||
Sbjct 309 CATCCAGTTCCACCAGCGTTACTTTATGGCGCTGAAGATCCTGTTCACGTTCATCGTACC 250
Query 108699 GGTGTGGGTGCCGGTCGCGTGTT--GGGGGGAGACGTTCGCGGCGGCGTTCCTGTCTCAG 108756
| || | || || || |||| ||| ||| || || | | ||||| | |
Sbjct 249 GTCGTTCATACC-GTGGC-TGTTCCTGGGCGAGCCGCTCTATCTGTCCTTCCTCGCGAAC 192
Query 108757 GCCGTTCTGAGGTACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCAC 108816
| ||| |||||| || || || ||||||||||||||||| || ||||| |||
Sbjct 191 TGTCTGCTGCGGTACGTGCTGACGCTGAACTTTACGTGGCTGGTGAACAGTGCGGCTCAC 132
Query 108817 ATGTACGGCGAC 108828
|| |||||| ||
Sbjct 131 ATCTACGGCAAC 120
Score = 98.7 bits (108), Expect = 8e-16
Identities = 171/246 (70%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
||||||||||| ||||| | || || || ||| ||||| ||| | ||||||||
Sbjct 6443 GCCGGGTTCGGCGTGACCGGTGGGGTGCACCGGCTGTGGTGCCATCGGTCGTACAAGGCG 6384
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||| || | | |||| | |||| |||| | || || |||||||| |||
Sbjct 6383 AAGCTACCGCTCCGCATCATCCTCATGTGCTGCTACTCGATAGCCGGCCAGAACACGATC 6324
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518
| ||||| | || || | |||||||||||||||| || ||| |||| || ||
Sbjct 6323 TACGACTGGGTCCGGGACCATCGCATTCACCACAAGTACTCGGAAACGGACGGT-GATCC 6265
Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578
||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| |
Sbjct 6264 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAGCA 6205
Query 108579 CCCCGA 108584
||| ||
Sbjct 6204 CCCGGA 6199
Score = 87.8 bits (96), Expect = 1e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| | ||||| |||||||||||||||||||| |||||||| | ||||||||||| |
Sbjct 3504 TGGCCATGGGCGAAGGATGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGG 3445
Query 108941 CCGAGTTGGGGAACGACT 108958
||||| |||| ||| |||
Sbjct 3444 CCGAGCTGGGCAACTACT 3427
>seq39285
Length=6951
Score = 91.5 bits (100), Expect = 1e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929
|||||| |||| || ||||||| |||||||||||||| |||||||||||||| | ||
Sbjct 3925 GGTGGCTTCGTTCGCATTCGGCGAAGGATGGCACAACTATCACCACGTGTTCCCGTGGGA 3866
Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957
||||||| | |||||| |||| ||| ||
Sbjct 3865 CTACAAGACGGCCGAGCTGGGCAACTAC 3838
>seq11541
Length=1875
Score = 87.8 bits (96), Expect = 1e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| | ||||| |||||||||||||||||||| |||||||| | ||||||||||| |
Sbjct 102 TGGCCATGGGCGAAGGATGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGG 161
Query 108941 CCGAGTTGGGGAACGACT 108958
||||| |||| ||| |||
Sbjct 162 CCGAGCTGGGCAACTACT 179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381577729012200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |