Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq10535 127 2e-24 >seq10535 Length=3010 Score = 127 bits (140), Expect = 2e-24 Identities = 470/716 (66%), Gaps = 18/716 (3%) Strand=Plus/Minus Query 52029 TGGAAGGTGGAGGAGGTTGATATGTCGAGGGACTATGAC-GACTTTGAGTCTAAATTAAA 52087 |||| |||||| ||||| || |||||| |||| |||| |||| || || | || Sbjct 725 TGGACGGTGGAAGAGGTGGACCTGTCGAAGGAC-ATGAAAGACTGGGAATCGC--TCAAG 669 Query 52088 CGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCAT 52147 | | |||||| | || ||| |||||| | || ||||||||||| | || | || Sbjct 668 CCGAG-CGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCCGCGTCGGACGGTAT 610 Query 52148 CGTGAACATTAACCTCATCGAGTACATGCAGCG-GAACGTTCCGGAACTCGAGGCGCAAT 52206 ||| ||| || || | ||| | | |||| | | || | || ||||| | | Sbjct 609 CGTAAACGAGAATCTGGTGGAGCGCTT-CAGCCAGGAGGTGCAGGTGACGGAGGCCCGCT 551 Query 52207 ACTTTTATAATTTGCA-AGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTC 52265 ||| || || || | ||| || ||| |||||||| || |||||| ||||| Sbjct 550 GCTTCTACGGGTTTCAGATTGCG-ATGGAGAACGTGCACAGCGAAATGTACTCGCTGCTG 492 Query 52266 ATTGAGCAGCTGATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCAC 52325 || || | ||| || | | ||||| || ||| | || ||| |||| || Sbjct 491 ATCGACACGTACATACGCGACCCGAAGGAGCGGGAGTATCTGTTCAACGCGATCGAA-AC 433 Query 52326 G-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGC 52384 | |||||||||| || ||||| | ||||| |||| |||||| ||| | | || Sbjct 432 GCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGC 373 Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444 | | | ||||| |||| || ||||| ||| ||||| | || || ||||| Sbjct 372 TAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATCTTCTTCAGTGGCAG 313 Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 |||||| |||||||| | | || | | ||| | ||||| || ||||| ||| || Sbjct 312 CTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTGACATTCTCGAA 253 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGAC 52564 ||| |||| ||||||||||| ||||||||| |||||||| ||||| | | | Sbjct 252 TGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTGCCTGATGTTCCGGTA 193 Query 52565 GCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGCGGTGG 52623 | ||| | |||| | || ||| | || | ||| || || || ||||| | Sbjct 192 TCTGGTG-CAGAAACCGTCGA--AGGAGCGCGTGACGGAG-ATCATCCGCGATGCGGTCG 137 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAAC-GCG 52682 ||||| ||||||| | ||| || || |||||||| |||| ||||||||| ||| Sbjct 136 TGATCGAGCAGGAGTTCCTGACGAAGGCACTTCCGGTCGACATGCTTGGCATGAACTGCG 77 Query 52683 CAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 | | |||| ||||||| ||||| ||||| ||||| ||||| || |||| || Sbjct 76 AACT-AATGTCGCAGTACATTGAGTTCGTGGCCGATCGGTTGTTGCTGGAGCTGGG 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496002327486000