Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq10535 127 2e-24
>seq10535
Length=3010
Score = 127 bits (140), Expect = 2e-24
Identities = 470/716 (66%), Gaps = 18/716 (3%)
Strand=Plus/Minus
Query 52029 TGGAAGGTGGAGGAGGTTGATATGTCGAGGGACTATGAC-GACTTTGAGTCTAAATTAAA 52087
|||| |||||| ||||| || |||||| |||| |||| |||| || || | ||
Sbjct 725 TGGACGGTGGAAGAGGTGGACCTGTCGAAGGAC-ATGAAAGACTGGGAATCGC--TCAAG 669
Query 52088 CGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCAT 52147
| | |||||| | || ||| |||||| | || ||||||||||| | || | ||
Sbjct 668 CCGAG-CGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCCGCGTCGGACGGTAT 610
Query 52148 CGTGAACATTAACCTCATCGAGTACATGCAGCG-GAACGTTCCGGAACTCGAGGCGCAAT 52206
||| ||| || || | ||| | | |||| | | || | || ||||| | |
Sbjct 609 CGTAAACGAGAATCTGGTGGAGCGCTT-CAGCCAGGAGGTGCAGGTGACGGAGGCCCGCT 551
Query 52207 ACTTTTATAATTTGCA-AGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTC 52265
||| || || || | ||| || ||| |||||||| || |||||| |||||
Sbjct 550 GCTTCTACGGGTTTCAGATTGCG-ATGGAGAACGTGCACAGCGAAATGTACTCGCTGCTG 492
Query 52266 ATTGAGCAGCTGATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCAC 52325
|| || | ||| || | | ||||| || ||| | || ||| |||| ||
Sbjct 491 ATCGACACGTACATACGCGACCCGAAGGAGCGGGAGTATCTGTTCAACGCGATCGAA-AC 433
Query 52326 G-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGC 52384
| |||||||||| || ||||| | ||||| |||| |||||| ||| | | ||
Sbjct 432 GCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGC 373
Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444
| | | ||||| |||| || ||||| ||| ||||| | || || |||||
Sbjct 372 TAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATCTTCTTCAGTGGCAG 313
Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504
|||||| |||||||| | | || | | ||| | ||||| || ||||| ||| ||
Sbjct 312 CTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTGACATTCTCGAA 253
Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGAC 52564
||| |||| ||||||||||| ||||||||| |||||||| ||||| | | |
Sbjct 252 TGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTGCCTGATGTTCCGGTA 193
Query 52565 GCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGCGGTGG 52623
| ||| | |||| | || ||| | || | ||| || || || ||||| |
Sbjct 192 TCTGGTG-CAGAAACCGTCGA--AGGAGCGCGTGACGGAG-ATCATCCGCGATGCGGTCG 137
Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAAC-GCG 52682
||||| ||||||| | ||| || || |||||||| |||| ||||||||| |||
Sbjct 136 TGATCGAGCAGGAGTTCCTGACGAAGGCACTTCCGGTCGACATGCTTGGCATGAACTGCG 77
Query 52683 CAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738
| | |||| ||||||| ||||| ||||| ||||| ||||| || |||| ||
Sbjct 76 AACT-AATGTCGCAGTACATTGAGTTCGTGGCCGATCGGTTGTTGCTGGAGCTGGG 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496002327486000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |