Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq16794 114 2e-20
seq10535 109 7e-19
seq41190 91.5 2e-13
>seq16794
Length=6728
Score = 114 bits (126), Expect = 2e-20
Identities = 204/292 (70%), Gaps = 8/292 (3%)
Strand=Plus/Plus
Query 175901 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 175959
|||||||||||||||| | ||| ||| ||||| ||| | || ||||| || || ||
Sbjct 367 GTGAAGATGTACCTCG-GGCTGGCGCTATCCTTGCCGCCCGTCAGCCGCGTACCGAACTG 425
Query 175960 ACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGAC 176019
||| | || | || || ||||| ||||| ||||| |||| | ||||| ||||
Sbjct 426 ACCGCCCGGGTACAGCAGGTTGATGTTGTTACTGCCCACGTAGTTCTGCGCCAGGTTGAT 485
Query 176020 AATCGTATCCGCG-AGGGAGACT--TCACCGTGATGGTAGGCCGACTTGTCCGCCACATA 176076
||||| || | || | |||| || ||||| |||||||| ||| | |||||||| |
Sbjct 486 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGA 542
Query 176077 CGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 176136
|||||| ||| |||||||||| ||| |||| ||| | |||||||| |||
Sbjct 543 GCCCGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCACGTGAACAG 602
Query 176137 GACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGTGCGATGGAACGC 176188
||||| | ||| ||||| || ||||| |||| | ||| ||||||
Sbjct 603 CACCTTCCGCTGGCCCGGCTTCAGCCCGTCCAGCATGCACGGGATCGAACGC 654
>seq10535
Length=3010
Score = 109 bits (120), Expect = 7e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| || |||||||| || ||||| || ||||||||||| ||| ||
Sbjct 210 AGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGTCAGCCC 269
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||| || || |||||||||| |||||| || || ||| |||| |||||||||
Sbjct 270 CGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGAT 329
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678
||||| || |||||||||| | |||||| |||||
Sbjct 330 ACCCTCAACTGCAGCGAACGCAACCACACGCTCCCCAAAG 369
>seq41190
Length=4563
Score = 91.5 bits (100), Expect = 2e-13
Identities = 204/300 (68%), Gaps = 6/300 (2%)
Strand=Plus/Plus
Query 10552 TGGCTCGTGAAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTC 10611
||| | |||| ||||| ||||| | || | |||| ||| |||||||||||||
Sbjct 930 TGGATAGTGATCAATTACCGCGAGGCGTACAACATGTTTGCCTGCAACGGTATTCTCTTC 989
Query 10612 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTA 10669
||||||||||| ||||| || || | | || |||||| || ||||| || | |||
Sbjct 990 AACCACGAGTCGCCCCGGCGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTG 1049
Query 10670 TCAAACAAATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGA 10729
| || | || | || || ||||| | | || | || || ||| | | ||
Sbjct 1050 GCGAAGATTTC--GCTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGC 1107
Query 10730 GGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAG 10789
| |||||||| ||||| || ||||| || ||||| |||||| | | | || | |||||
Sbjct 1108 GTGACTGGGGCCACGCAAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGC-AGAAG 1166
Query 10790 -AGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848
|| |||| || | ||| |||||||||| || || || || || | || || || |||
Sbjct 1167 CAGCCGGAAGATTTCGTCATCGCGACGGGCGAAACGCATTCGGTGCGAGAATTTGTCGAG 1226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613185683883000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |