Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq14831 95.1 3e-14
seq20716 86.0 1e-11
>seq14831
Length=12387
Score = 95.1 bits (104), Expect = 3e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| | ||||||||||| |||| |||||| || | || |||
Sbjct 12265 CGAAGCCGAAGAACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAGAGTG 12324
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
| ||| || ||||||||||| ||||||||||| ||||||||||| || ||
Sbjct 12325 CGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 12374
>seq20716
Length=12815
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
||||| ||||||||||| ||||||||||| ||||||||||| || || || || ||
Sbjct 2 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATACCCTCC 61
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
||||| ||||| |||||| |||| || || | | || || || | ||
Sbjct 62 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 121
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||||||||| ||||| || || || ||
Sbjct 122 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTG 156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178288325683975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |