Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq10535 410 1e-109
seq14831 87.8 2e-12
>seq10535
Length=3010
Score = 410 bits (454), Expect = 1e-109
Identities = 519/704 (74%), Gaps = 12/704 (2%)
Strand=Plus/Plus
Query 132730 TCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCA-GACGCAC 132788
|||||||||||||| ||||| |||||||| |||||| || | || |||| | || ||
Sbjct 43 TCGGCCACGAACTCAATGTACTGCGACATTAGTTCGCAGTTCATGCCAAGCATGTCG-AC 101
Query 132789 CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCT 132848
||| || || | || || || |||||||| ||||||| ||| || ||| ||| |
Sbjct 102 CGGAAGTGCCTTCGTCAGGAACTCCTGCTCGATCACGACCGCATCGCGGATGATCTCCGT 161
Query 132849 AACGCGCGCCGCGCTCGGCCGT---TGCACCAAATGCTTGAACATCAAGCAAGCAAAGTC 132905
|||||| || ||| | || ||||||| || | |||||||| ||||||||||||
Sbjct 162 CACGCGCTCC---TTCGACGGTTTCTGCACCAGATACCGGAACATCAGGCAAGCAAAGTC 218
Query 132906 GCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAG 132965
|| |||| |||||||| | || || || || || ||| |||| || ||||| ||
Sbjct 219 ACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGTCAGCCCCGGCATCAG 278
Query 132966 GCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGAC 133025
|||||| || || ||||| || ||||| || || ||||| ||||||| ||||| ||
Sbjct 279 GCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGATACCCTCAAC 338
Query 133026 GGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAG 133085
|| ||||| || |||| ||||| || || | || | ||||||| ||||||| |||
Sbjct 339 TGCAGCGAACGCAACCACACGCTCCCCAAAGTTAGCCTTCTTGCTGGAGATCCAGTTCAG 398
Query 133086 CGCCCATTCGGCCTT-TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGA 133144
|||||| |||||||| |||||| |||||||||| ||||||||| ||||| |||| |
Sbjct 399 CGCCCAGTCGGCCTTCTTCTTT-ACGCACGGCAGCGTTTCGATCGCGTTGAACAGATACT 457
Query 133145 GTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTA 133204
||| | || | || | ||| |||||||| || ||| |||||||| ||| |
Sbjct 458 CCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCGCTGTGCA 517
Query 133205 CGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTT 133264
|||||||||| || || ||||| ||||| ||||| || ||||| ||||||||| || |
Sbjct 518 CGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCACCTCCT 577
Query 133265 GAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCA 133324
| ||| ||||| |||||||| ||||| ||||| ||||| |||||||| ||||| |
Sbjct 578 GGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGACGCGGCGAAGAAGGCAA 637
Query 133325 GCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGCGTGTCC 133383
| |||||| |||||| || |||||| | | | |||| |||||||| | |||||
Sbjct 638 GTACGTGCGAGATGAAGTGACGCTCGCT-CGGCTTGAGCGATTCCCAGTCTTTCATGTCC 696
Query 133384 TTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
|| |||||||||||||| || || ||||| || || || || ||
Sbjct 697 TTCGACAGGTCCACCTCTTCCACCGTCCAGAAGGAAGCTTCCGC 740
>seq14831
Length=12387
Score = 87.8 bits (96), Expect = 2e-12
Identities = 91/117 (78%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 38343 GAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGA 38401
|||||||| |||||| || || ||||| || || | ||| ||||| |||||||| ||||
Sbjct 12386 GAGGGAAT-CCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGG 12328
Query 38402 GCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| || ||| ||||||||||| ||||| |||| |||| ||||| || ||
Sbjct 12327 ACGCACTCTGTCCGATTACAACATCCAGAAGGAGTCGACCTTGCACTTGGTTCTTCG 12271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499910678192000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |