Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq35382 107 2e-18 >seq35382 Length=6325 Score = 107 bits (118), Expect = 2e-18 Identities = 208/307 (68%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 13655 AATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCGCTCC 13714 || ||||| || || || || | ||||||| || ||||| ||| | ||| |||||| Sbjct 3892 AACTTTCGCTTGCAGCCGTCGTAGTTCATGTAGCGAATTTTGCCAAAAATTTCCCGCTCC 3833 Query 13715 ATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTTGGGA 13774 |||| | |||| || | ||| || ||||||||||| ||| | || ||||| ||| Sbjct 3832 TTCCATCCCTGATCATGGATGCCGGCGATCGACCACATGCACCCGACGTATCCGTTCGGA 3773 Query 13775 TCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGGCGTTGATTAAAGCCACTGTA 13834 ||||| ||||||| ||||| ||||| | ||| ||||| | | || | Sbjct 3772 TCGCGCCCATCCAGGCTGTAGCGATCGTTCAGATAGATGGCCGTTTCGAGCGCTTCCTCG 3713 Query 13835 GGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCCGTGCATT 13894 |||| | | ||| || | |||||| || |||||||| || | || | |||||||| Sbjct 3712 GGCGTTTTCGTCCACTCGAGTATTTTCTTCGCCCAATACATGCGCAGGAACCCGTGCATC 3653 Query 13895 TTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGTTTCGGAA 13954 ||| | | | | ||||| |||||| |||||||||| ||| || || | || | Sbjct 3652 TTGGCCTCCTTCACCAGCTGCAGCTGAGCTGCGTTCCACAGGTCGTCGTGGGTGTGGGCA 3593 Query 13955 TTTTCTA 13961 |||||| Sbjct 3592 GTTTCTA 3586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396075917217225