Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq10535 250 5e-61
seq15782 109 1e-18
>seq10535
Length=3010
Score = 250 bits (276), Expect = 5e-61
Identities = 474/697 (68%), Gaps = 3/697 (0%)
Strand=Plus/Plus
Query 47961 GATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACA 48020
|||| || ||| |||| ||||| | ||||| || | ||||||||| | | | |
Sbjct 41 GATCGGCCACGAACTCAATGTACTGCGACATTAGTTCGCAGTTCATGCCAAGCATGTCGA 100
Query 48021 CGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCT 48080
| || | ||||| || || ||||||| ||| ||| || || || | | |||| |
Sbjct 101 CCGGAAGTGCCTTCGTCAGGAACTCCTGCTCGATCACGACCGCATCGCGGATGATCTCCG 160
Query 48081 TAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGT 48140
| ||||| || || ||||| | ||| | | | | | || ||| |||||||
Sbjct 161 TCACGCGCTCCTTCGACGGTTTCTGCACCAGATACCGGA---ACATCAGGCAAGCAAAGT 217
Query 48141 CCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGA 48200
| | ||||| || ||||| || ||| ||| | || ||||| || || ||||| |
Sbjct 218 CACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGTCAGCCCCGGCATCA 277
Query 48201 CCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCA 48260
|| | || || |||||||| || ||||| || |||| ||||||||| ||||| |
Sbjct 278 GGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGATACCCTCAA 337
Query 48261 CTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAA 48320
|||| |||||||| | | ||| || || ||| |||||| ||||||||| |
Sbjct 338 CTGCAGCGAACGCAACCACACGCTCCCCAAAGTTAGCCTTCTTGCTGGAGATCCAGTTCA 397
Query 48321 GCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCT 48380
|||||||||| ||||||||||| | ||| |||| ||| || || || ||| || | ||
Sbjct 398 GCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAACAGATACT 457
Query 48381 TGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCA 48440
| ||| | ||| | || || || |||| | |||||| || |||||
Sbjct 458 CCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCGCTGTGCA 517
Query 48441 CATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTG 48500
| ||||| || || ||||| |||||||||||| | |||||| ||||||||| ||
Sbjct 518 CGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCACCTCCT 577
Query 48501 TGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAA 48560
| ||| | ||||| ||||||||| || || || || || || || || ||||||||||
Sbjct 578 GGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGACGCGGCGAAGAAGGCAA 637
Query 48561 GGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTT 48620
| || || | ||| || |||||| | | |||| | | |||| | | | ||| |
Sbjct 638 GTACGTGCGAGATGAAGTGACGCTCGCTCGGCTTGAGCGATTCCCAGTCTTTCATGTCCT 697
Query 48621 TGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
| ||||||||| |||||||| ||||||||||| ||
Sbjct 698 TCGACAGGTCCACCTCTTCCACCGTCCAGAAGGAAGC 734
>seq15782
Length=14063
Score = 109 bits (120), Expect = 1e-18
Identities = 105/135 (78%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548
||| ||| ||||||| || ||||||||| || ||| ||||| || || ||||| |||||
Sbjct 11016 CTTCAGCTCCTTCACCTTGTCCTCCAGCTTCGAGATCCGTTCGAGCTTCCGCCGCCGGCA 11075
Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608
|||| ||| |||| ||||| || || | ||| || || ||||||||| |||||
Sbjct 11076 CTTGGAGGCGGCCACCCGGTTTCGTAGCCGCTTCCGCTCGAGCTTGATGCGCTCCTGCGA 11135
Query 241609 CTCCATGTCGATCGG 241623
|||||||||||||||
Sbjct 11136 CTCCATGTCGATCGG 11150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931044618592000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |