Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq41190 141 1e-28 >seq41190 Length=4563 Score = 141 bits (156), Expect = 1e-28 Identities = 350/523 (67%), Gaps = 10/523 (2%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTT-CTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 || || || || || ||||| || || | ||||| | || | ||| |||||||| || || Sbjct 1195 CCCGTCGCGATGACGAAATCTTCCGGCTGCTTCT-GCTGCATCATCAACCACATTGCTTC 1137 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 ||| || ||| | || || ||||||||||| | ||| ||||| || || | | || Sbjct 1136 GACGTAGTCTTTTGCGTGGCCCCAGTCACGCTTCGAATCGAGATTACCGAGCTCGACGCA 1077 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAA 47964 || |||| || || || ||| | | | || || || || || ||||| Sbjct 1076 CTCCTGCTGGCCGAGCGAAAT--CTTCGCCACCGAGCGAGTGATTTTGCGTGTCACAAAG 1019 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 | ||||| || | || || || || || || |||||||| | |||||| |||| | Sbjct 1018 TTCTCACCCCGCCGGGGCGACTCGTGGTTGAAGAGAATACCGTTGCAGGCAAACATGTTG 959 Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGA 48084 || | || || || || | ||||||||||| || || | ||||||| | | || || Sbjct 958 TACGCCTCGCGGTAATTGATCACTATCCAGTAGCCGTACATTTTTGCACAAGCGTACGGC 899 Query 48085 GAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGT 48144 || || |||||||| || || | || |||| || || || |||||||||||| ||| Sbjct 898 GAGCGCGGATAGAATGGAGTTTTTTCGTTCTGCGGCGTTTCGACCACCTTACCATAGAGT 839 Query 48145 TCACTGGTGGATGCTTGATAGATACGAACC--CTATCTTCCATCTCAAGCAAACGGACTG 48202 || ||||| || ||||||| || ||| || ||| | || || | ||||| | Sbjct 838 TCGGACGTGGACGCCTGATAGAAGCGTACCGACT-TCTCCTGTCCCACG-GTACGGATGG 781 Query 48203 CCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAA 48262 | ||||||| | ||| || || | ||||| | | ||||| ||| || || | Sbjct 780 CATCAAGCAGCCGCAGTGTACCGACCGCATCCACTTCCGCCGTATATTCGCTCAGGTCGA 721 Query 48263 ACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 |||| | ||| ||||| || || || |||| || || || || Sbjct 720 ACGAGATCTTGACATGGCTTTGCGCGGCAAGGTTGTAGATTTC 678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665145639341000