Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6295 104 7e-17 seq15908 93.3 1e-13 >seq6295 Length=23914 Score = 104 bits (114), Expect = 7e-17 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| |||||| ||||||||||||||| || |||||||| | |||||| || || Sbjct 10075 GCACCGTGAGAAATCTGACAATCACGCTCCATCTCGCCGAAACGCAAACCACCGTCACGC 10134 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | |||||| ||||| ||| |||| | || ||||||| | || ||| Sbjct 10135 GCACGACCCTCCATCGGCTGGCGAACGAGAATCTGCACAGGACCGCGCGCACGCGAATGG 10194 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 |||||| | ||||| ||||| |||||||| ||| | | ||| |||| |||| Sbjct 10195 ATCTTATCGTCCACCATGTGCTTCAGACGCTGATAGTAGGTGGGCCCGAGAAAGA 10249 Score = 87.8 bits (96), Expect = 5e-12 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||| |||| |||||||| |||||||| || || ||||||||||||||||| | | Sbjct 10432 TGGCCGATGGTCATACGGGACGGAATAGCGTGCGGGTTGATGATGATGTCGGGCGTAATA 10491 Query 251899 CCATCAGCA-GTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATA-GTTCCCTTTT 251956 || || ||| ||||| |||||||||| | | | || || ||| | || ||||| | Sbjct 10492 CCTTC-GCACGTGAACGGCATATCCTCCTGC-CGGTACTGAATCCCGCACGTACCCTTCT 10549 Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAA 252016 ||||||| || || |||||| || || || ||| ||| || || | ||| | Sbjct 10550 GTCCGTGGCGTGACGCGAACTTGTCGCCGATCTGCGGAATGCGCACCGAGCGCACGCGGA 10609 Query 252017 CCTTACAGAAGTTGTAACCATCACCGTTG 252045 ||| ||||| ||||| || |||| |||| Sbjct 10610 TCTTGCAGAACTTGTAGCCCTCACTGTTG 10638 >seq15908 Length=4384 Score = 93.3 bits (102), Expect = 1e-13 Identities = 174/252 (69%), Gaps = 8/252 (3%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 ||||| |||||| | ||| ||||| || || || ||| | || || || || ||| Sbjct 249 TCCATCGCCTTGATCAGACGCCGCTGGATGTAGCCGGTTTCGGCCGTCTTGACGGCGGTA 190 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || | ||| | || |||||||| || |||||| | | ||| ||| ||| ||||| Sbjct 189 TCGATCAAACCCTCGCGGCCACCCATCGCGTGGAAGTAGAACTCGGTCGG-CGTCAGCCC 131 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCG---AATCGTCGAACTTGGT 302750 | | | ||| | || ||||| || |||| ||||||| ||||||| |||| | Sbjct 130 GGCCAGGTACGAGTTTTCCACGAACCCGCGCGACTCGGGCCCGTAATCGTC---CTTGAT 74 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || |||||||| | || | ||| | ||||| ||||| || || |||||||| Sbjct 73 GAAATGGGGCAGGGTGCGCTTACGGAACCCGAACGGGATGCGCTTACCCTCCACGTTCTG 14 Query 302811 CTGTCCCAGGCA 302822 ||| || | ||| Sbjct 13 CTGACCGACGCA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471026992478725