Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq20716 98.7 9e-16 seq14831 84.2 2e-11 >seq20716 Length=12815 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 160 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 101 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || || || || || ||||| Sbjct 100 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCAGATCA 41 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || ||| ||||||| ||||| || |||||||||||| Sbjct 40 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGAT 4 >seq14831 Length=12387 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/145 (74%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 24803 GAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG 24862 || ||||| || || ||||| || ||| ||||||| ||||| || ||||||||||| || Sbjct 12386 GAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGA--CG 12329 Query 24863 AGAAACA---TGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 || || |||| ||||| ||||| || ||||| ||||| | |||||||| | || Sbjct 12328 -GACGCACTCTGTCCGATTACAACATCCAGAAGGAGTCGACCTTGCACTTGGTTCTTCGG 12270 Query 24920 TTGCGCGGAGGCGGAACTGAGCCAA 24944 | ||||| | | ||||||| ||| Sbjct 12269 CTTCGCGGTG--GAAACTGAGTCAA 12247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449661825539000