Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6811 149 5e-31 >seq6811 Length=10561 Score = 149 bits (164), Expect = 5e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||| || | |||||||||||| || || ||||| ||||||||||| |||||||| | Sbjct 7087 TTGTGGTCAAACTGCGTTTGCGCTCCAAGTTCGCAACCGAAGTACTTGGTCGGGTAGGTA 7028 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || ||||| || | ||| ||| | ||| | |||||| ||||| || |||||||| ||| Sbjct 7027 GCGGGACGACCGATCGCTCGGGCCACTTCCGCCATGTTCACGATCACCGTCTTGATACCG 6968 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || || || || || |||||||| |||||| ||||| ||||| |||||||| || Sbjct 6967 TTTCCTTTACCCTCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAAGATATCG 6908 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | ||| || || || ||||| || || |||| Sbjct 6907 GTCACGTTACGATTCACGTTTACGGTTGCCAT 6876 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| ||||| || | ||||| ||||| | |||||| | | || | ||||| | Sbjct 7979 CGGTGGGTTCTTGATGATGAACGTGTTCACCTTATGGTTCACCTCGAGGGGACCGTGGAA 7920 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 || || || ||||| ||||| |||| | ||| || | ||||| | || || || Sbjct 7919 GCCACAGGCCTTGCATCCCTGCGAGATCGTACCCTTCTTTGACGACACCAGCAGATCCGT 7860 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||||||||| || ||||| |||| || || || ||||| ||||| | ||| || Sbjct 7859 TTCCGGGTTGTCGCACTCCGGGCACAGGACGAAACGACGAATGAAGCCATCCAACAGATC 7800 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| ||| ||||| | || || || ||||| |||||||| Sbjct 7799 CTGCAGCTTGGCGGCATCGTGCGCACCATTCACAATGAAGCGTTCGTT 7752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412630654069025