Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq10535 125 1e-22 seq15908 91.5 2e-12 >seq10535 Length=3010 Score = 125 bits (138), Expect = 1e-22 Identities = 205/293 (70%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || || ||||| |||||||||||||| ||||| |||||||| || ||||| ||| Sbjct 265 AGCCCCGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAG 324 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| ||||| || || || || | || | ||||| | ||||| ||| ||| Sbjct 325 AAGATACCCTCAACTGCAGCGAACGCAACCACACGCTC-CCCAAAGT----TAGCCTTCT 379 Query 794497 T--TGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGA 794554 | || |||||| |||| |||||| || ||||| ||| | || | |||| ||| |||| Sbjct 380 TGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGA 439 Query 794555 TGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCG 794614 | ||| || || | ||| ||| |||||| | ||| |||||||| || |||| Sbjct 440 TCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCG 499 Query 794615 AGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| | || ||| | ||| || || || ||||| || || || |||||| Sbjct 500 AGTACATTTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAG 552 Score = 91.5 bits (100), Expect = 2e-12 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||| | || || ||||||| ||||||| | |||| ||||| Sbjct 547 AAGCAGCGGGCCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTT 606 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCG-TC 796259 ||||| ||||| |||||||| ||||| || |||||| ||| |||||||||||| || Sbjct 607 ACGATACCGTCCGACGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTC 666 Query 796260 GTCGCTGAGCGAGACCCAGTGGACCGTGT-CGGCGCCGAGGTCGACCTCCTCGGCGGTCC 796318 | | ||||||| |||||| | ||| | || | ||||| ||||| || | |||| Sbjct 667 GGC-TTGAGCGATTCCCAGTCTTTCATGTCCTTCGAC-AGGTCCACCTCTTCCACCGTCC 724 Query 796319 AAAAGGAGGCCTCGGCCT 796336 | ||||| || || |||| Sbjct 725 AGAAGGAAGCTTCCGCCT 742 >seq15908 Length=4384 Score = 91.5 bits (100), Expect = 2e-12 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 431021 GCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGAT 431080 ||||||| ||||| || ||| ||||||||| | ||| || | || |||| | Sbjct 91 GCCCGAGTCGCGCGGGTTCGTGGAAAACTCGTACCTGGCCGGGCTGACGCCGACCGAGTT 150 Query 431081 GTTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 | | ||| ||| || || ||||||||| | |||| || ||||||||||||||||| Sbjct 151 CTACTTCCACGCGATGGGTGGCCGCGAGGGTTTGATCGATACCGCCGTCAAGACGGCCGA 210 Query 431141 GACGGGCTACATCCAGCGTCGGTGCATCAAATCGATGGAG 431180 || |||||||||||||| || ||||| |||||||| Sbjct 211 AACCGGCTACATCCAGCGGCGTCTGATCAAGGCGATGGAG 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7911786646530075