Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq20716 114 8e-21 seq14831 86.0 4e-12 >seq20716 Length=12815 Score = 114 bits (126), Expect = 8e-21 Identities = 122/159 (77%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 34821 CATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34880 |||| ||||| ||||| |||||||||||||| || ||||| ||| |||| | ||||||| Sbjct 3 CATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATACCCTCCT 62 Query 34881 TGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGT 34938 |||| | || || || || || || |||| || || |||||| |||| ||| Sbjct 63 TGTCCTGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGT 120 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| ||||||||||| || || ||||||||||| Sbjct 121 AATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 159 >seq14831 Length=12387 Score = 86.0 bits (94), Expect = 4e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 ||||| || | | || || |||| ||| | ||| ||||||||| ||||| || || Sbjct 12256 TTTCCACCGCGAAGCCGAAGAACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCG 12315 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || || |||| | || ||||| ||||| |||||||||||||| || ||||| ||| || Sbjct 12316 GACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGC 12375 Query 34868 GGCACCCCCTCC 34879 || | |||||| Sbjct 12376 GGGATTCCCTCC 12387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325526383701575