Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq41765 104 2e-17 >seq41765 Length=2378 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 103857 AGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTACT 103916 |||| |||||| | |||| ||||||||| || || || ||| ||||| || | || Sbjct 1539 AGGAGTGGCCCACGTCGATGAAGCAGAAACCGCAGCAGCTGAGCGATGCCGGCTTTTTCT 1480 Query 103917 ACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGGG 103976 |||||||| | ||||| | || |||||| ||| | |||||| || ||||| |||| Sbjct 1479 ACACCGGCAAGAGCGATCGCGTCAAGTGCTTCAGCTGTGGCGGTGGGCTGAAGGACTGGG 1420 Query 103977 AGCACGATGATGAGCCGTGGCAACAACACGCG 104008 |||| || |||||||||||| | || |||||| Sbjct 1419 AGCAGGACGATGAGCCGTGGGAGCAGCACGCG 1388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398672989536325