Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq2530 82.4 1e-10 >seq2530 Length=9775 Score = 82.4 bits (90), Expect = 1e-10 Identities = 200/296 (68%), Gaps = 9/296 (3%) Strand=Plus/Minus Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612 ||||||||| ||||| | || || ||||||||| | || || || |||| | Sbjct 1773 AGGTGATTTGGGACCTGTGTACGGTTTTCAATGGCGCCACTTTGGGGCCAAATACAAAAC 1714 Query 180613 CTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTAT 180672 || || | | || | |||||||| ||||||||| | | || || || | || Sbjct 1713 GTGCCATGACGATTACACTGGGCAAGGGATAGACCAACTCGCAGAGGTAATCGACAAGAT 1654 Query 180673 AAAAAATAATCCCGAATGC-CGAAGAATAATCATAGATAGT-TGGAATGTATCACAATTA 180730 ||||| || |||| | | || |||| ||||| || | |||||| || | | Sbjct 1653 TAAAAACAA-CCCGTACGATCGTCGAATCATCAT-GAGCGCCTGGAATCCGTCCGATATC 1596 Query 180731 CCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTT-AGAAATAAAAT 180789 || |||||||||||||||| ||||| ||||||| ||||||| |||| | || | | Sbjct 1595 CCCAATATGGCTCTTCCACCTTGTCATTGTTTGGCTCAATTTTTTGTTGACAACGGAGAA 1536 Query 180790 TTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCAT 180845 |||| ||||| |||||||| | || || ||| | || || |||||||||| Sbjct 1535 TTAT----CATGCCAGATGTATCAACGGTCGGCCGATGTGGGCTTGGGTGTACCAT 1484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 654936592325000