Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq10535 187 2e-42 seq20716 104 2e-17 >seq10535 Length=3010 Score = 187 bits (206), Expect = 2e-42 Identities = 379/551 (69%), Gaps = 19/551 (3%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| |||||||| |||||| |||||||||||||| |||||||| || || || Sbjct 204 CAGGCAAGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGT 263 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 ||| || ||||| | ||| | |||| | |||| ||||| ||||||||||| || Sbjct 264 CAGCCCCGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAA 323 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | ||||| || || || || |||| ||||| | || | ||| ||||||| Sbjct 324 GAAGATACCCTCAACTGCAGCGAACGCAACCACACGCTCCCCAAAGTTAGCCTTCTTGCT 383 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGC 120878 | |||||| |||| ||||| |||||||| || |||||||||| | |||| ||| Sbjct 384 GGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGC 443 Query 120879 GTTCAGCAGCATGTCGCGCTCGCCCTCCTC-CGCAATCAGCTGATGGATGAGCAGATTGT 120937 ||| | ||| || ||||| | || || | | || | ||| ||||| || Sbjct 444 GTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTG-TCGATCAGCAGCGAGT 502 Query 120938 ACATTTCCGTGTGCACGCACTCGATCAGCACT-TGCTGGTTGTAAAAGTACTGCGCCTCC 120996 ||||||| |||||||| ||| ||| ||| | || ||| ||| | | |||||| Sbjct 503 ACATTTCGCTGTGCACGTTCTCCATC-GCAATCTGAAACCCGTAGAAGCAGCGGGCCTCC 561 Query 120997 AGCTCGGGCACCGCC-CGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGC 121055 | | ||||| || |||| | | ||| | || || || ||||||| ||| | Sbjct 562 GTCACCTGCACCTCCTGGCTG-AAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGA 620 Query 121056 GGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCG-TCGTCCGTGAGCTTGT 121114 ||||||||||| || || |||||| ||| ||||| |||||| ||| ||||| Sbjct 621 CGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCG-------GCTTGA 673 Query 121115 GCG---CAAAATC-GTCATAGTCCTTGGACAGGTCGACCTCCTCCACCTTCCACATGCAA 121170 ||| | | || |||| |||||| |||||||| ||||| |||||| |||| | | || Sbjct 674 GCGATTCCCAGTCTTTCAT-GTCCTTCGACAGGTCCACCTCTTCCACCGTCCAGAAGGAA 732 Query 121171 TCGAGCGCCTG 121181 | |||||| Sbjct 733 GCTTCCGCCTG 743 >seq20716 Length=12815 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || |||||||| || || ||||| || |||||| Sbjct 5 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATACCCTCCTTG 64 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | ||| | ||| || | |||||| || || | ||| | | Sbjct 65 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 124 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || ||||| ||||| |||||||| Sbjct 125 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483167457287000