Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq10535 89.7 5e-13 >seq10535 Length=3010 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 46743 AATGCGTTCGAGCACG-TGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGAT 46801 || ||| |||| ||| |||| ||||| || |||||| | ||||| |||| ||||| Sbjct 446 AACGCGATCGAA-ACGCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGAT 388 Query 46802 CGAGAGCGAGACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGT 46861 | ||| ||| || | | | ||||| |||| || ||||| ||| || || | Sbjct 387 CTCCAGCAAGAAGGCTAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTAT 328 Query 46862 GtttttttCGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGG 46921 || || ||||| ||||| ||||| || | | || | ||| | |||||||| Sbjct 327 CTTCTTCAGTGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGG 268 Query 46922 CCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTG 46981 ||||| ||| || ||| |||||||||||||||| ||||| ||| |||||||| || Sbjct 267 GCTGACATTCTCGAATGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTG 208 Query 46982 TCT 46984 || Sbjct 207 CCT 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476361425943000