Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq10535 212 9e-49 seq15908 91.5 2e-12 seq38210 86.0 9e-11 >seq10535 Length=3010 Score = 212 bits (234), Expect = 9e-49 Identities = 347/487 (71%), Gaps = 16/487 (3%) Strand=Plus/Minus Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCG-ACACGGTCCAC 1455854 |||| || || ||||| ||||| | || ||||| ||||| | || | ||| | || Sbjct 742 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAGGTGGACCT-GTCGAAGGACATGAAAGAC 684 Query 1455855 TGGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCG 1455913 |||| ||||| | | ||| |||||| || |||||| |||||| || ||||| || || Sbjct 683 TGGGAATCGCTCAA-GCCGAGCGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTT-CG 626 Query 1455914 CCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAAT 1455973 |||| || || ||||| |||||| |||| | ||||| | | ||||| || Sbjct 625 CCGCGTCGGACGGTATCGTAAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGG 566 Query 1455974 TGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAA 1456033 || | ||||| || | || |||||||| ||||| || || || ||| | ||| |||| Sbjct 565 TGACGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAAA 506 Query 1456034 CCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTC 1456093 |||||||| ||||||||||| ||| | |||||| ||| ||| | || || Sbjct 505 TGTACTCGCTGCTGATCGACACGTACATACGCGACCCGAAGGAGCGGGAGTATCTGTTCA 446 Query 1456094 GCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT-- 1456151 ||| ||||| ||| |||||| || | ||| ||||||||||||||| |||| ||||| Sbjct 445 ACGCGATCGAAACGCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCT 386 Query 1456152 -CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGG 1456209 || |||| ||| || |||||| ||||| | || | || || || || ||||| Sbjct 385 CCAGCAAGAAGG--CT---AACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGG 331 Query 1456210 CATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGC 1456268 ||||| ||| ||||| || ||| |||||||| ||||| |||||||||||||| |||| Sbjct 330 TATCTTCTTCAGTGGCAGCTT-TGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGC 272 Query 1456269 CCGGTCT 1456275 | || || Sbjct 271 CGGGGCT 265 >seq15908 Length=4384 Score = 91.5 bits (100), Expect = 2e-12 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1816126 CTCCATCGACTTGATGCACCGGCGCTGGATGTAGCCACGTCCGGCGGTCTTGACGGCCGT 1816185 |||||||| |||||| || |||||||||||||| | |||| ||||||||||| || Sbjct 250 CTCCATCGCCTTGATCAGACGCCGCTGGATGTAGCCGGTTTCGGCCGTCTTGACGGCGGT 191 Query 1816186 GTCGACCAGGCCCTCGCGGCCGCCGATCATGTGCAAAAACATCTCGCGCGAGTTGAGGCC 1816245 |||| || ||||||||||| || ||| ||| || | | |||| || | || || Sbjct 190 ATCGATCAAACCCTCGCGGCCACCCATCGCGTGGAAGTAGAACTCGGTCGGCGTCAGCCC 131 Query 1816246 GCGCTCGTACGAGTTGCGCACAAAGCCGCGGCTCTCGGGC 1816285 | | ||||||||| ||| || ||||| ||||||| Sbjct 130 GGCCAGGTACGAGTTTTCCACGAACCCGCGCGACTCGGGC 91 >seq38210 Length=5930 Score = 86.0 bits (94), Expect = 9e-11 Identities = 228/346 (66%), Gaps = 2/346 (1%) Strand=Plus/Minus Query 332873 AAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAG 332932 || |||| || ||||| || ||| | | |||||||| | || |||||||| Sbjct 2886 AAACGCAACATCGCACACCGCGACTGTATTGGCTCGATGATCTTTTCGCTAGTGTTGCAT 2827 Query 332933 GCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGG 332992 |||| ||||| || || || ||| | | ||||||||||| || || ||||| || Sbjct 2826 GCCAACGCAAAGCGGGTTGTGTTGCTGTAGATTTCCATGGTCCGGCGTAGCGCCTGCTGA 2767 Query 332993 GCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGC 333052 || | ||| | || ||| ||||| || || || | ||||||||| |||||| | || Sbjct 2766 GCACCTTCCGTCATGCTGTCCGCCTCATCCAGAATCACGATCTTGTGACGCCCGCGTGGT 2707 Query 333053 AGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGC 333112 || ||| | | | ||| |||||| | | || || || || | || ||| Sbjct 2706 AGCGTTACCTTCTGCTGGGCAAACATTTTGATCTTACTACGTACCACATCAATACCACGC 2647 Query 333113 TCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGG-CGGCCGCACCCAAGAGGACGCG 333171 |||| || || || || || ||||||||||| |||| | || ||| | || | || Sbjct 2646 TCGTTTGAAGCATTCAGCTCAAGCACGGCCTC-TCGGAAGTTCGGACCGAGCAGAATACG 2588 Query 333172 CGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCC 333217 ||||| || ||| |||| || || ||| || || |||||| Sbjct 2587 GGCCAGACAAAGGATAGTCGTAGTTTTACCCACTCCCGGTGGACCC 2542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7173767456691850