Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq10535 91.5 1e-13 >seq10535 Length=3010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 241/363 (66%), Gaps = 15/363 (4%) Strand=Plus/Minus Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 || || || || || || |||||||| ||||| || || || | || ||||||||| Sbjct 560 GAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAAATGTAC 501 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGA---AGCATCGATTGTTTAAT 44047 || ||||| || |||||||| || | | ||| || ||| |||| || Sbjct 500 TCGCTGCTGATCGACACGTACATACGCGACCCGAAGGAGCGGGAGTATC---TGTTCAAC 444 Query 44048 GCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAA 44106 ||||| ||||| | || |||| | || | || || |||||||| || || ||||| Sbjct 443 GCGATCGAAACGCTGCCGTGCG-TAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATC-- 387 Query 44107 TTCA-----AATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATT 44161 | || || | | ||||| || || | || ||||| || | || || || || Sbjct 386 TCCAGCAAGAAGGCTAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATC 327 Query 44162 TTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGG 44221 ||||| || ||||||||||| || ||| | ||||| || || ||||||| ||| Sbjct 326 TTCTTCAGTGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGG 267 Query 44222 TTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 |||| || || |||||| | || || || || || | || || || ||||||||| Sbjct 266 CTGACATTCTCGAATGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTGC 207 Query 44282 TTG 44284 || Sbjct 206 CTG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397252915509625