Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq2530 89.7 5e-13 >seq2530 Length=9775 Score = 89.7 bits (98), Expect = 5e-13 Identities = 202/301 (67%), Gaps = 6/301 (2%) Strand=Plus/Plus Query 31255 TAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAA 31314 || || || |||||||||||||||||||| |||| |||||| || |||||||| | | Sbjct 1468 TAGCTTGCGATGTTGAATGGTACACCCAAGCCCACATCGGCCGACCGTTGATACATCTGG 1527 Query 31315 CAGGAAAGTTCATCTCCG--GTC-ACGTAAAATTGAAATAACACATGACAAGGCGGCAAA 31371 || || | | |||||| ||| || |||||||| || ||||||||| || | | Sbjct 1528 CATGATAAT---TCTCCGTTGTCAACAAAAAATTGAGCCAAACAATGACAAGGTGGAAGA 1584 Query 31372 GCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTGGA 31431 ||||| | | ||||| |||||||| ||||| | | | || ||| | || Sbjct 1585 GCCATATTGGGGATATCGGACGGATTCCAGGCGCTCATGATGATTCGACGATCGTACGGG 1644 Query 31432 TCACGCTTAATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTATAATTA 31491 | ||||||| || || || ||| | ||| || || |||| || || |||| Sbjct 1645 TTGTTTTTAATCTTGTCGATTACCTCTGCGAGTTGGTCTATCCCTTGCCCAGTGTAATCG 1704 Query 31492 CTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATAGGTCCC 31551 || || ||||| || || || || ||||||||||| || || | ||||||| Sbjct 1705 TCATGGCACGTTTTGTATTTGGCCCCAAAGTGGCGCCATTGAAAACCGTACACAGGTCCC 1764 Query 31552 A 31552 | Sbjct 1765 A 1765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512748746714000