Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq16794 111 2e-19
seq10535 109 7e-19
seq41190 87.8 2e-12
>seq16794
Length=6728
Score = 111 bits (122), Expect = 2e-19
Identities = 203/292 (70%), Gaps = 8/292 (3%)
Strand=Plus/Plus
Query 179038 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 179096
|||||||||||||||| | ||| ||| ||||| ||| | || ||||| || || ||
Sbjct 367 GTGAAGATGTACCTCG-GGCTGGCGCTATCCTTGCCGCCCGTCAGCCGCGTACCGAACTG 425
Query 179097 ACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 179156
||| | || | || || ||||| ||||| |||| ||||| | |||| ||||
Sbjct 426 ACCGCCCGGGTACAGCAGGTTGATGTTGTTACTGCCCACGTAGTTCTGCGCCAGGTTGAT 485
Query 179157 AATCGTATCCGCG-AGGGAGACT--TCACCGTGATGGTAAGCCGACTTGTCCGCCACATA 179213
||||| || | || | |||| || ||||| ||||| || ||| | |||||||| |
Sbjct 486 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGA 542
Query 179214 TGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 179273
|||||| ||| |||||||||| ||| |||| ||| | |||||||| |||
Sbjct 543 GCCCGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCACGTGAACAG 602
Query 179274 CACCTTTCTTTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 179325
|||||| | || ||||| || ||||| |||| || ||| ||||||
Sbjct 603 CACCTTCCGCTGGCCCGGCTTCAGCCCGTCCAGCATGCACGGGATCGAACGC 654
>seq10535
Length=3010
Score = 109 bits (120), Expect = 7e-19
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| || |||||||| || ||||| || ||||||||||| ||| ||
Sbjct 211 GCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGTCAGCCCC 270
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||| || || |||||||||| |||||| || || ||| |||| |||||||||
Sbjct 271 GGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGATA 330
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG-GAGCGGGACTTTGTATCAAA 130194
||||| || |||||||||| | |||||| ||||| ||| ||| | |
Sbjct 331 CCCTCAACTGCAGCGAACGCAACCACACGCTCCCCAAAGTTAGC-CTTCTTGCTGGAGAT 389
Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248
||| |||| |||||| | ||||| |||| | ||||| | || | ||||||
Sbjct 390 CCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGC 443
>seq41190
Length=4563
Score = 87.8 bits (96), Expect = 2e-12
Identities = 203/300 (68%), Gaps = 6/300 (2%)
Strand=Plus/Plus
Query 11913 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTC 11972
||| | |||| |||||||| || | || | ||||| ||| ||||||||||||
Sbjct 930 TGGATAGTGATCAATTACCGCGAGGCGTACAACATGTTTGCCTGCAACGGTATTCTCTTC 989
Query 11973 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTA 12030
||||||||||| ||||| || || | | || |||||| || ||||| || | |||
Sbjct 990 AACCACGAGTCGCCCCGGCGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTG 1049
Query 12031 TCAAACAAATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGA 12090
| || | || | || || ||||| | | || | || || ||| | | ||
Sbjct 1050 GCGAAGATTTC--GCTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGC 1107
Query 12091 GGGACTGGGGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAG 12150
| |||||||| || || || ||||| || ||||| |||||| | | | || | |||||
Sbjct 1108 GTGACTGGGGCCACGCAAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGC-AGAAG 1166
Query 12151 -AGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 12209
|| |||| || | ||| |||||||||| || || || || || | || || || |||
Sbjct 1167 CAGCCGGAAGATTTCGTCATCGCGACGGGCGAAACGCATTCGGTGCGAGAATTTGTCGAG 1226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618111101303000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |