Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq16794 96.9 4e-15
seq10535 86.0 7e-12
>seq16794
Length=6728
Score = 96.9 bits (106), Expect = 4e-15
Identities = 200/292 (68%), Gaps = 8/292 (3%)
Strand=Plus/Plus
Query 168431 GTAAAGATATACCTCGTTTGAGACGC-ATCCTTACCACCCATGAGACGCGTACCAAACTG 168489
|| ||||| ||||||| | ||| |||||| || ||| | || |||||||| |||||
Sbjct 367 GTGAAGATGTACCTCGGGCTGG-CGCTATCCTTGCCGCCCGTCAGCCGCGTACCGAACTG 425
Query 168490 ACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGAC 168549
||| | ||| | || || ||||| ||||| |||| ||||| | ||||| ||||
Sbjct 426 ACCGCCCGGGTACAGCAGGTTGATGTTGTTACTGCCCACGTAGTTCTGCGCCAGGTTGAT 485
Query 168550 AATCGTGTCCGCG-AGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACAAA 168606
||||| || | |||| |||| || ||||||||||| || | | || || || |
Sbjct 486 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGA 542
Query 168607 TGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAGCATGCGTACAT 168666
|||||| ||| ||||| |||| ||| |||| || | |||||| | | |||
Sbjct 543 GCCCGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCACGTGAACAG 602
Query 168667 AACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCGATAGAACGC 168718
||||| || || ||||| || || ||| |||| | ||| ||||||
Sbjct 603 CACCTTCCGCTGGCCCGGCTTCAGCCCGTCCAGCATGCACGGGATCGAACGC 654
>seq10535
Length=3010
Score = 86.0 bits (94), Expect = 7e-12
Identities = 98/129 (76%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886
|||||||||||||||||| ||| ||| |||| | || | ||||| |||||||| ||
Sbjct 338 GTTGAGGGTATCTTCTTCAGTGGCAGCTT-TGCGGCCATCTTCTGGCTGAAGAAGCGCGG 280
Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946
|| ||||| || || ||||| || ||||| ||||| || ||||||||||| |||
Sbjct 279 CCTGATGCCGGGGCTGACATTCTCGAATGAGCTGATCTCGCGCGACGAGGGACTGCACTG 220
Query 94947 AGAGTTTGC 94955
|| |||||
Sbjct 219 TGACTTTGC 211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582955134887000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |