Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq16794 96.9 4e-15 seq10535 86.0 7e-12 >seq16794 Length=6728 Score = 96.9 bits (106), Expect = 4e-15 Identities = 200/292 (68%), Gaps = 8/292 (3%) Strand=Plus/Plus Query 168431 GTAAAGATATACCTCGTTTGAGACGC-ATCCTTACCACCCATGAGACGCGTACCAAACTG 168489 || ||||| ||||||| | ||| |||||| || ||| | || |||||||| ||||| Sbjct 367 GTGAAGATGTACCTCGGGCTGG-CGCTATCCTTGCCGCCCGTCAGCCGCGTACCGAACTG 425 Query 168490 ACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGAC 168549 ||| | ||| | || || ||||| ||||| |||| ||||| | ||||| |||| Sbjct 426 ACCGCCCGGGTACAGCAGGTTGATGTTGTTACTGCCCACGTAGTTCTGCGCCAGGTTGAT 485 Query 168550 AATCGTGTCCGCG-AGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACAAA 168606 ||||| || | |||| |||| || ||||||||||| || | | || || || | Sbjct 486 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGA 542 Query 168607 TGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAGCATGCGTACAT 168666 |||||| ||| ||||| |||| ||| |||| || | |||||| | | ||| Sbjct 543 GCCCGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCACGTGAACAG 602 Query 168667 AACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCGATAGAACGC 168718 ||||| || || ||||| || || ||| |||| | ||| |||||| Sbjct 603 CACCTTCCGCTGGCCCGGCTTCAGCCCGTCCAGCATGCACGGGATCGAACGC 654 >seq10535 Length=3010 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886 |||||||||||||||||| ||| ||| |||| | || | ||||| |||||||| || Sbjct 338 GTTGAGGGTATCTTCTTCAGTGGCAGCTT-TGCGGCCATCTTCTGGCTGAAGAAGCGCGG 280 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946 || ||||| || || ||||| || ||||| ||||| || ||||||||||| ||| Sbjct 279 CCTGATGCCGGGGCTGACATTCTCGAATGAGCTGATCTCGCGCGACGAGGGACTGCACTG 220 Query 94947 AGAGTTTGC 94955 || ||||| Sbjct 219 TGACTTTGC 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582955134887000