Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq35382 163 2e-35 seq14831 87.8 2e-12 >seq35382 Length=6325 Score = 163 bits (180), Expect = 2e-35 Identities = 216/300 (72%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 135474 TGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCA 135533 |||||||||| || || | |||||| | || | ||| |||||||| || |||||| Sbjct 3613 TGTGGAACGCAGCTCAGCTGCAGCTGGTGAAGGAGGCCAAGATGCACGGGTTCCTGCGCA 3672 Query 135534 TGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACACG 135593 |||||||||| || || ||| | || ||| | | |||| | || ||||| || | Sbjct 3673 TGTATTGGGCGAAGAAAATACTCGAGTGGACGAAAACGCCCGAGGAAGCGCTCGAAACGG 3732 Query 135594 CAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTT 135653 | || | | | || ||| |||||| | ||||| |||||| | || || ||||| || | Sbjct 3733 CCATCTATCTGAACGATCGCTACAGCCTGGATGGGCGCGATCCGAACGGATACGTCGGGT 3792 Query 135654 GTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGCA 135713 | |||||||| || ||| | || ||||| |||||||||||||| || | ||||||| Sbjct 3793 GCATGTGGTCGATCGCCGGCATCCATGATCAGGGATGGAAGGAGCGGGAAATTTTTGGCA 3852 Query 135714 AGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAATTTGTACGTGA 135773 | |||||||| |||||||| ||||| || | |||| ||| | || || || ||||| Sbjct 3853 AAATTCGCTACATGAACTACGACGGCTGCAAGCGAAAGTTTGACGTGAACGCGTTCGTGA 3912 >seq14831 Length=12387 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 27087 GAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGT 27146 || || || || || ||||| |||||| | || | ||||||||| || |||| ||| | Sbjct 12386 GAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGA 12327 Query 27147 TCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTG 27206 || | |||||||||||||| || |||||||||||||| || |||||| | || | Sbjct 12326 CGCACTCTGTCCGATTACAACATCCAGAAGGAGTCGACCTTGCACTTGGTTCTTCGGCTT 12267 Query 27207 CGGGGTGG 27214 || ||||| Sbjct 12266 CGCGGTGG 12259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434690475576000