Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq20716 91.5 1e-13 seq14831 91.5 1e-13 >seq20716 Length=12815 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| || || || || || || || || || Sbjct 162 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 103 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 |||| || | || ||| | || | || | | ||||| || ||| | |||||||| Sbjct 102 TCGGATACGATCGAGAATGTGAAGGCGAAGA-TCCAGGACAAGGAGGGTATCCCGCCAGA 44 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA 23765 ||| |||||| | || || |||||||| || ||||| || Sbjct 43 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGA 5 >seq14831 Length=12387 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 23719 CCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTA 23778 ||||||||||| |||||| | || || |||||||| || ||||| |||| ||||||| | Sbjct 12377 CCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTG 12318 Query 23779 GGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||||||||||| || || ||||| || || || || ||| | || | || || ||| Sbjct 12317 TCCGATTACAACATCCAGAAGGAGTCGACCTTGCACTTGGTTCTTCGGCTTCGCGGTGGA 12258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337836890297900