Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq10535 118 9e-22
>seq10535
Length=3010
Score = 118 bits (130), Expect = 9e-22
Identities = 461/715 (64%), Gaps = 20/715 (3%)
Strand=Plus/Plus
Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435
||| || || || || || || || ||||| ||| ||||||||||| || |||| |
Sbjct 36 CAACCGATCGGCCACGAACTCAATGTACTGCGACATTAGTTCGCAGTTCATGCCAAGCA- 94
Query 4436 TCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
| || || || || || | |||| ||||| || || || || || || ||| |
Sbjct 95 TGTCGACCGGAAGTGCCTTCGTCAGGAACTCCTGCTCGATCACGACCGCATCGCGGATGA 154
Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554
| || | | || || || ||||| | || | || | |||| | || ||||
Sbjct 155 TCTCCGTCACGCGCTCCTTCGACGGTTTCTGCACCAGATACCGGAACATCAGGCAAGCAA 214
Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613
| ||||| |||| || ||||| | || | ||||| || || || || || | || |||
Sbjct 215 AGTCACAGTGCAGTCCCTCGTCGC-GCGAGATCAGCTCATTCGAGAATGTCAGCCCCGGC 273
Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673
|| | || | ||| || ||||| || || || ||||| ||| ||||| || ||
Sbjct 274 ATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGATACCC 333
Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-ATC 4730
|| || || || ||||| || | || ||| || | | || || | || | |||
Sbjct 334 TCAACTGCAGCGAACGCAACCACACGCTCCCCAAA---GTTAGCCTTCTTGCTGGAGATC 390
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
|| || | ||||||| || || ||||| |||||||| | || | || ||||| ||
Sbjct 391 CAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAAC 450
Query 4791 AATTTACT-----TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACA 4845
| | ||| | ||| ||||| | || || ||||| || || || ||||
Sbjct 451 AGAT-ACTCCCGCTCCTTC----GGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACA 505
Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905
|||| || | || || || ||||||||||| ||||| ||||| | || || || |
Sbjct 506 TTTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCA 565
Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965
| || || || | | || | || || | || |||||||| |||||||| || |
Sbjct 566 CCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGACGCGG 625
Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGT 5025
| || || || | || || || || |||| | ||| ||||| || || |||||
Sbjct 626 CGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGCTTGAGCGATTCCCAGT 685
Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080
|| || || | | || || ||||| || ||||| || || ||||||||
Sbjct 686 CTTTCATGTCCTTCGACAGGTCCACCTCTTCCACCGTCCAGAAGGAAGCTTCCGC 740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426831394336025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |