Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq10535 118 9e-22 >seq10535 Length=3010 Score = 118 bits (130), Expect = 9e-22 Identities = 461/715 (64%), Gaps = 20/715 (3%) Strand=Plus/Plus Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 ||| || || || || || || || ||||| ||| ||||||||||| || |||| | Sbjct 36 CAACCGATCGGCCACGAACTCAATGTACTGCGACATTAGTTCGCAGTTCATGCCAAGCA- 94 Query 4436 TCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 | || || || || || | |||| ||||| || || || || || || ||| | Sbjct 95 TGTCGACCGGAAGTGCCTTCGTCAGGAACTCCTGCTCGATCACGACCGCATCGCGGATGA 154 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 | || | | || || || ||||| | || | || | |||| | || |||| Sbjct 155 TCTCCGTCACGCGCTCCTTCGACGGTTTCTGCACCAGATACCGGAACATCAGGCAAGCAA 214 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 | ||||| |||| || ||||| | || | ||||| || || || || || | || ||| Sbjct 215 AGTCACAGTGCAGTCCCTCGTCGC-GCGAGATCAGCTCATTCGAGAATGTCAGCCCCGGC 273 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || | || | ||| || ||||| || || || ||||| ||| ||||| || || Sbjct 274 ATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGATACCC 333 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-ATC 4730 || || || || ||||| || | || ||| || | | || || | || | ||| Sbjct 334 TCAACTGCAGCGAACGCAACCACACGCTCCCCAAA---GTTAGCCTTCTTGCTGGAGATC 390 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790 || || | ||||||| || || ||||| |||||||| | || | || ||||| || Sbjct 391 CAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAAC 450 Query 4791 AATTTACT-----TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACA 4845 | | ||| | ||| ||||| | || || ||||| || || || |||| Sbjct 451 AGAT-ACTCCCGCTCCTTC----GGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACA 505 Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905 |||| || | || || || ||||||||||| ||||| ||||| | || || || | Sbjct 506 TTTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCA 565 Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 | || || || | | || | || || | || |||||||| |||||||| || | Sbjct 566 CCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGACGCGG 625 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGT 5025 | || || || | || || || || |||| | ||| ||||| || || ||||| Sbjct 626 CGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGCTTGAGCGATTCCCAGT 685 Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 || || || | | || || ||||| || ||||| || || |||||||| Sbjct 686 CTTTCATGTCCTTCGACAGGTCCACCTCTTCCACCGTCCAGAAGGAAGCTTCCGC 740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426831394336025