Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq20716 125 1e-23
seq16794 91.5 3e-13
seq41310 86.0 1e-11
seq40674 86.0 1e-11
seq5269 86.0 1e-11
seq3111 86.0 1e-11
>seq20716
Length=12815
Score = 125 bits (138), Expect = 1e-23
Identities = 125/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 282941 GCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTC 283000
||||||||| || || || ||||| ||||||| ||| || || || ||| ||||||||
Sbjct 1 GCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATACCCTC 60
Query 283001 CTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGT 283060
|||||| |||||||| || || || | ||||| || ||||| | ||||| || || ||
Sbjct 61 CTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGT 120
Query 283061 GATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| ||||||||||| | || || ||||| |||||||| ||
Sbjct 121 AATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 162
>seq16794
Length=6728
Score = 91.5 bits (100), Expect = 3e-13
Identities = 183/269 (68%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 273778 TCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACT 273837
||||||| |||||||| | || || |||||||| || ||||| || ||| ||||
Sbjct 365 TCGTGAAGATGTACCTCGGGCTGGCGCTATCCTTGCCGCCCGTCAGCCGCGTACCGAACT 424
Query 273838 GACC-CTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTC 273896
|||| | |||| | ||| ||| |||||||| || || ||||| | ||| |||| ||
Sbjct 425 GACCGCCCGGGTAC-AGCAGGTTGATGTTGTTACTGCCCACGTAGTTCTGCGCCAGGTTG 483
Query 273897 ACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAA 273956
| ||| ||| || || |||||||||||| |||||| ||| || | |
Sbjct 484 ATGATCGTCGAGCAGAGCGACTGCTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGAG 543
Query 273957 CCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAAC 274016
|| | ||| || |||||||| |||| | | ||| |||||||| | ||| |
Sbjct 544 CCCGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCACGTGAACAGC 603
Query 274017 ACCTTCCGCTGCGAGGGCTTGAACCCATC 274045
||||||||||| ||||| | ||| ||
Sbjct 604 ACCTTCCGCTGGCCCGGCTTCAGCCCGTC 632
>seq41310
Length=2265
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 119 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 175
>seq40674
Length=1550
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1543 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1487
>seq5269
Length=13955
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 13949 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 13893
>seq3111
Length=12476
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 12370 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 12426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046176929318950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |