Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq2530 100 4e-16
>seq2530
Length=9775
Score = 100 bits (110), Expect = 4e-16
Identities = 229/339 (68%), Gaps = 12/339 (4%)
Strand=Plus/Minus
Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533
||| ||||| |||||||| ||||||||||||||| | || ||||| || |||| ||
Sbjct 1773 AGGTGATTTGGGACCTGTGTACGGTTTTCAATGGCGCCACTTTGGGGCCAAATACAAAAC 1714
Query 50534 TTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTAT-AACGACGT 50592
||| | | ||||| || ||||| | || ||||| | | | || || | |
Sbjct 1713 GTGCCATGACGATTACACTGGGCAAGGGATAGACCAACTCGCAGAGGTAATCGACAAGAT 1654
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
| ||||| ||||| ||||||| || || | |||| |||||||||||| |||||||
Sbjct 1653 TAAAAAC-AACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCC 1595
Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG----CCACAGACAAT 50708
| | | | | || || |||||| ||| |||||||| || | || || ||
Sbjct 1594 CCAATATGGCTCTTCCACCTTGTCATTGTTTGGCTCAATTTTTTGTTGACAACGGAGAA- 1536
Query 50709 GTTTTATCCTGTCA-ATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAA 50767
||||| || || ||| |||||| | || || ||| |||| || || || || |||||
Sbjct 1535 ---TTATCATGCCAGATG-TATCAACGGTCGGCCGATGTGGGCTTGGGTGTACCATTCAA 1480
Query 50768 CGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806
| | || ||| | || | || || ||||||| ||
Sbjct 1479 CATCGCAAGCTACTCGTTGCTTACCCATATGATCGCGCA 1441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666725610903000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |