Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2530 100 4e-16 >seq2530 Length=9775 Score = 100 bits (110), Expect = 4e-16 Identities = 229/339 (68%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533 ||| ||||| |||||||| ||||||||||||||| | || ||||| || |||| || Sbjct 1773 AGGTGATTTGGGACCTGTGTACGGTTTTCAATGGCGCCACTTTGGGGCCAAATACAAAAC 1714 Query 50534 TTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTAT-AACGACGT 50592 ||| | | ||||| || ||||| | || ||||| | | | || || | | Sbjct 1713 GTGCCATGACGATTACACTGGGCAAGGGATAGACCAACTCGCAGAGGTAATCGACAAGAT 1654 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | ||||| ||||| ||||||| || || | |||| |||||||||||| ||||||| Sbjct 1653 TAAAAAC-AACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCC 1595 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG----CCACAGACAAT 50708 | | | | | || || |||||| ||| |||||||| || | || || || Sbjct 1594 CCAATATGGCTCTTCCACCTTGTCATTGTTTGGCTCAATTTTTTGTTGACAACGGAGAA- 1536 Query 50709 GTTTTATCCTGTCA-ATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAA 50767 ||||| || || ||| |||||| | || || ||| |||| || || || || ||||| Sbjct 1535 ---TTATCATGCCAGATG-TATCAACGGTCGGCCGATGTGGGCTTGGGTGTACCATTCAA 1480 Query 50768 CGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 | | || ||| | || | || || ||||||| || Sbjct 1479 CATCGCAAGCTACTCGTTGCTTACCCATATGATCGCGCA 1441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666725610903000