Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq569 161 1e-34
seq1541 149 6e-31
seq1511 100 3e-16
seq654 100 3e-16
>seq569
Length=217393
Score = 161 bits (178), Expect = 1e-34
Identities = 286/411 (70%), Gaps = 6/411 (1%)
Strand=Plus/Minus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857
||| || ||||| || || || ||| |||| | |||||||||||| || | | | ||
Sbjct 206563 ATCGGCCACAAACTCAATGTACTGGGACATCAGTTCGCAGTTCATGCCGAGCATATCCAC 206504
Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917
||| || |||| |||||||||| |||||| || || ||||| || || || |
Sbjct 206503 CGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCACTACCGCATCACGGATGATCTCCGT 206444
Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977
|| || |||| ||||| | || |||| | ||||| || || |||||||||||
Sbjct 206443 CACGCGCTCCTTCGACGGCTTCTGCACCAGATACCTGAACATTAGGCACGCGAAATCGCA 206384
Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037
||| ||||||||||| | || || ||||| || || |||| |||||||||| ||
Sbjct 206383 ATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGGCATCAGGCC 206324
Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAA-CGACC-CAGAAAAGAATATACCCTCGACG 17095
||| ||||| | ||| || || | || || | ||| | ||| ||| ||||||||||||
Sbjct 206323 TCGCTTCTTCAGCCAGAAAATGGACGCAAAGCTACCGCTGAA--GAAGATACCCTCGACG 206266
Query 17096 GATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTG 17154
| |||||||||| | |||||| | | | || | ||| | ||| ||||| || |
Sbjct 206265 GCCGCAAACGCGACCACACGTTCGCCAAAGTTGGCCTTCTTGCT-CGAGATCCAGTTAAG 206207
Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205
|||| || || || | ||| | ||| | |||||| ||||| || ||
Sbjct 206206 GGCCCAGTCAGCCTTCTTCTTCACGCACGGTAGCGTTTCGATGGCATTGAA 206156
Score = 127 bits (140), Expect = 2e-24
Identities = 181/253 (72%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| ||||||||||| || || |||||| ||| || | || ||||| || ||||||
Sbjct 206057 ATGTACGTATCGATCAGCAGCGAGTACATCTCGCTATGCACATTTTCCATCGCAATCTGA 205998
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || |||| || || |||||| | ||| |||||| | |||
Sbjct 205997 AAGCCGTAGAAGCAGCGTGCCTCCGTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGA 205938
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
||||||||||| ||||| || ||| || || || |||| | ||| |||||||
Sbjct 205937 TTTTCGTTCACAATGCCATCAGACGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATGA 205878
Query 17414 TTTTCGTCCGGTGTAAGAACGCG--CCAGTCCTTTAAATCTTTGGATATATCCACTTCTT 17471
|||| ||| | |||||| ||||||||| | || || |||| ||||| ||||
Sbjct 205877 CGTTCGCTCGGCTT--CAACGCGTCCCAGTCCTTCATGTCCTTCGATAGGTCCACCTCTT 205820
Query 17472 CGGGGGTCCAAAA 17484
| |||||||||
Sbjct 205819 CCACGGTCCAAAA 205807
>seq1541
Length=81579
Score = 149 bits (164), Expect = 6e-31
Identities = 280/409 (68%), Gaps = 2/409 (0%)
Strand=Plus/Minus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857
||| || ||||| || || || || |||| | |||||||||||| || | | | ||
Sbjct 59883 ATCGGCCACAAACTCAATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGCATATCCAC 59824
Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917
|| || |||| |||||||||| |||||| || || ||||| || || || |
Sbjct 59823 TGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCACTACCGCATCACGGATGATCTCCGT 59764
Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977
|| || |||| ||||| | || |||| | ||||| || || |||||||||||
Sbjct 59763 CACGCGCTCCTTCGACGGCTTCTGCACCAGATACCTGAACATTAGGCACGCGAAATCGCA 59704
Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037
||| ||||||||||| | || || ||||| || || |||| |||||||||| ||
Sbjct 59703 ATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGGCATCAGGCC 59644
Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097
|| ||||| | ||| || || | || || || ||||| |||||||||||||
Sbjct 59643 ACGCTTCTTCAGCCAGAAAATGGACGCAAAGCTGCCGCTGAAGAAGATACCCTCGACGGC 59584
Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCA 17156
|||||||||| | |||||| | | | || | ||| | ||| ||||| || |
Sbjct 59583 AGCAAACGCGACCACACGTTCGCCAAAGTTGGCCTTCTTGCT-CGAGATCCAGTTAAGGG 59525
Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205
|||| ||||| || | ||| | ||| | |||||| ||||| || ||
Sbjct 59524 CCCAGTCGGCCTTCTTCTTCACGCACGGTAGCGTTTCGATGGCATTGAA 59476
Score = 131 bits (144), Expect = 2e-25
Identities = 182/253 (72%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| ||||||||||| || || |||||| ||| || | || ||||| || ||||||
Sbjct 59380 ATGTACGTATCGATCAGCAGCGAGTACATCTCGCTATGCACATTTTCCATCGCAATCTGA 59321
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || |||| || || |||||| | ||| |||||| | |||
Sbjct 59320 AAGCCGTAGAAGCAGCGTGCCTCCGTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGA 59261
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
||||||||||||||||| || ||| || || || |||| | ||| |||||||
Sbjct 59260 TTTTCGTTCACGATGCCATCAGACGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATGA 59201
Query 17414 TTTTCGTCCGGTGTAAGAACGCG--CCAGTCCTTTAAATCTTTGGATATATCCACTTCTT 17471
|||| ||| | |||||| ||||||||| | || || |||| ||||| ||||
Sbjct 59200 CGTTCGCTCGGCTT--CAACGCGTCCCAGTCCTTCATGTCCTTCGATAGGTCCACCTCTT 59143
Query 17472 CGGGGGTCCAAAA 17484
| |||||||||
Sbjct 59142 CCACGGTCCAAAA 59130
>seq1511
Length=84564
Score = 100 bits (110), Expect = 3e-16
Identities = 177/256 (69%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTGTCGTGGAGCCCC 119842
||||| || || ||||| ||||| | ||| |||||||| || ||||| | ||
Sbjct 80102 TTCATGTACCGAATCTTCCCGAAAATTTCACGCTCCTTCCAGCCTTGATCGTGAATGCCT 80161
Query 119843 GCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTA 119902
|| | | ||| | ||| || ||||| ||||| ||||| |||||| | ||| |
Sbjct 80162 GCGATCGACCACATGCAACCGACGTACCCGTTCGGATCGCGTCCATCCAGGCTGTACCGA 80221
Query 119903 TCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCAGGAGTCTCGCTCCATTCCAGTA 119960
||||| | ||||| | || | | || ||| || || || | | |||| |||||||
Sbjct 80222 TCGTTCAGATAGATG--GCCGTTGCAAGCGCTTCCTCTGGCGTTTTGGTCCACTCCAGTA 80279
Query 119961 tttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAA 120020
| ||||| ||||||||||| | || | |||||||| ||||| || ||||| || |
Sbjct 80280 TCTTTTTGGCCCAGTACATCCTCAAAAACCCATGCATCTTACCCTCCTTCACCATCTGCA 80339
Query 120021 GTTGTGCGGCGTTCCA 120036
| ||||| | ||||||
Sbjct 80340 GCTGTGCCGAGTTCCA 80355
>seq654
Length=198528
Score = 100 bits (110), Expect = 3e-16
Identities = 177/256 (69%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTGTCGTGGAGCCCC 119842
||||| || || ||||| ||||| | ||| |||||||| || ||||| | ||
Sbjct 167077 TTCATGTACCGAATCTTCCCGAAAATTTCACGCTCCTTCCAGCCTTGATCGTGAATGCCG 167018
Query 119843 GCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTA 119902
|| | | ||| | ||| || ||||| ||||| ||||| |||||| | ||| |
Sbjct 167017 GCGATCGACCACATGCAACCGACGTACCCGTTCGGATCGCGTCCATCCAGGCTGTACCGA 166958
Query 119903 TCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCAGGAGTCTCGCTCCATTCCAGTA 119960
||||| | ||||| | || | | || ||| || || || | | |||| |||||||
Sbjct 166957 TCGTTCAGATAGATG--GCCGTTGCAAGCGCTTCCTCTGGCGTTTTGGTCCACTCCAGTA 166900
Query 119961 tttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAA 120020
| ||||| ||||||||||| | || | |||||||| ||||| || ||||| || |
Sbjct 166899 TCTTTTTGGCCCAGTACATCCTCAAAAACCCATGCATCTTACCCTCCTTCACCATCTGCA 166840
Query 120021 GTTGTGCGGCGTTCCA 120036
| ||||| | ||||||
Sbjct 166839 GCTGTGCCGAGTTCCA 166824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517218317101200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |