Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq569 161 1e-34 seq1541 149 6e-31 seq1511 100 3e-16 seq654 100 3e-16 >seq569 Length=217393 Score = 161 bits (178), Expect = 1e-34 Identities = 286/411 (70%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || ||||| || || || ||| |||| | |||||||||||| || | | | || Sbjct 206563 ATCGGCCACAAACTCAATGTACTGGGACATCAGTTCGCAGTTCATGCCGAGCATATCCAC 206504 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||| || |||| |||||||||| |||||| || || ||||| || || || | Sbjct 206503 CGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCACTACCGCATCACGGATGATCTCCGT 206444 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || || |||| ||||| | || |||| | ||||| || || ||||||||||| Sbjct 206443 CACGCGCTCCTTCGACGGCTTCTGCACCAGATACCTGAACATTAGGCACGCGAAATCGCA 206384 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 ||| ||||||||||| | || || ||||| || || |||| |||||||||| || Sbjct 206383 ATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGGCATCAGGCC 206324 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAA-CGACC-CAGAAAAGAATATACCCTCGACG 17095 ||| ||||| | ||| || || | || || | ||| | ||| ||| |||||||||||| Sbjct 206323 TCGCTTCTTCAGCCAGAAAATGGACGCAAAGCTACCGCTGAA--GAAGATACCCTCGACG 206266 Query 17096 GATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTG 17154 | |||||||||| | |||||| | | | || | ||| | ||| ||||| || | Sbjct 206265 GCCGCAAACGCGACCACACGTTCGCCAAAGTTGGCCTTCTTGCT-CGAGATCCAGTTAAG 206207 Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 |||| || || || | ||| | ||| | |||||| ||||| || || Sbjct 206206 GGCCCAGTCAGCCTTCTTCTTCACGCACGGTAGCGTTTCGATGGCATTGAA 206156 Score = 127 bits (140), Expect = 2e-24 Identities = 181/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||||||||| || || |||||| ||| || | || ||||| || |||||| Sbjct 206057 ATGTACGTATCGATCAGCAGCGAGTACATCTCGCTATGCACATTTTCCATCGCAATCTGA 205998 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || |||| || || |||||| | ||| |||||| | ||| Sbjct 205997 AAGCCGTAGAAGCAGCGTGCCTCCGTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGA 205938 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 ||||||||||| ||||| || ||| || || || |||| | ||| ||||||| Sbjct 205937 TTTTCGTTCACAATGCCATCAGACGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATGA 205878 Query 17414 TTTTCGTCCGGTGTAAGAACGCG--CCAGTCCTTTAAATCTTTGGATATATCCACTTCTT 17471 |||| ||| | |||||| ||||||||| | || || |||| ||||| |||| Sbjct 205877 CGTTCGCTCGGCTT--CAACGCGTCCCAGTCCTTCATGTCCTTCGATAGGTCCACCTCTT 205820 Query 17472 CGGGGGTCCAAAA 17484 | ||||||||| Sbjct 205819 CCACGGTCCAAAA 205807 >seq1541 Length=81579 Score = 149 bits (164), Expect = 6e-31 Identities = 280/409 (68%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || ||||| || || || || |||| | |||||||||||| || | | | || Sbjct 59883 ATCGGCCACAAACTCAATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGCATATCCAC 59824 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 || || |||| |||||||||| |||||| || || ||||| || || || | Sbjct 59823 TGGCAGGGCTTTCGTCAAAAATTCTTGCTCGATCACTACCGCATCACGGATGATCTCCGT 59764 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || || |||| ||||| | || |||| | ||||| || || ||||||||||| Sbjct 59763 CACGCGCTCCTTCGACGGCTTCTGCACCAGATACCTGAACATTAGGCACGCGAAATCGCA 59704 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 ||| ||||||||||| | || || ||||| || || |||| |||||||||| || Sbjct 59703 ATGCAATCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAACGTCAGCCCGGGCATCAGGCC 59644 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 || ||||| | ||| || || | || || || ||||| ||||||||||||| Sbjct 59643 ACGCTTCTTCAGCCAGAAAATGGACGCAAAGCTGCCGCTGAAGAAGATACCCTCGACGGC 59584 Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCA 17156 |||||||||| | |||||| | | | || | ||| | ||| ||||| || | Sbjct 59583 AGCAAACGCGACCACACGTTCGCCAAAGTTGGCCTTCTTGCT-CGAGATCCAGTTAAGGG 59525 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 |||| ||||| || | ||| | ||| | |||||| ||||| || || Sbjct 59524 CCCAGTCGGCCTTCTTCTTCACGCACGGTAGCGTTTCGATGGCATTGAA 59476 Score = 131 bits (144), Expect = 2e-25 Identities = 182/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||||||||| || || |||||| ||| || | || ||||| || |||||| Sbjct 59380 ATGTACGTATCGATCAGCAGCGAGTACATCTCGCTATGCACATTTTCCATCGCAATCTGA 59321 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || |||| || || |||||| | ||| |||||| | ||| Sbjct 59320 AAGCCGTAGAAGCAGCGTGCCTCCGTTACCTGCACTTCCTGGCTGAAGCGTTCCACCAGA 59261 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 ||||||||||||||||| || ||| || || || |||| | ||| ||||||| Sbjct 59260 TTTTCGTTCACGATGCCATCAGACGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAATGA 59201 Query 17414 TTTTCGTCCGGTGTAAGAACGCG--CCAGTCCTTTAAATCTTTGGATATATCCACTTCTT 17471 |||| ||| | |||||| ||||||||| | || || |||| ||||| |||| Sbjct 59200 CGTTCGCTCGGCTT--CAACGCGTCCCAGTCCTTCATGTCCTTCGATAGGTCCACCTCTT 59143 Query 17472 CGGGGGTCCAAAA 17484 | ||||||||| Sbjct 59142 CCACGGTCCAAAA 59130 >seq1511 Length=84564 Score = 100 bits (110), Expect = 3e-16 Identities = 177/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTGTCGTGGAGCCCC 119842 ||||| || || ||||| ||||| | ||| |||||||| || ||||| | || Sbjct 80102 TTCATGTACCGAATCTTCCCGAAAATTTCACGCTCCTTCCAGCCTTGATCGTGAATGCCT 80161 Query 119843 GCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTA 119902 || | | ||| | ||| || ||||| ||||| ||||| |||||| | ||| | Sbjct 80162 GCGATCGACCACATGCAACCGACGTACCCGTTCGGATCGCGTCCATCCAGGCTGTACCGA 80221 Query 119903 TCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCAGGAGTCTCGCTCCATTCCAGTA 119960 ||||| | ||||| | || | | || ||| || || || | | |||| ||||||| Sbjct 80222 TCGTTCAGATAGATG--GCCGTTGCAAGCGCTTCCTCTGGCGTTTTGGTCCACTCCAGTA 80279 Query 119961 tttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAA 120020 | ||||| ||||||||||| | || | |||||||| ||||| || ||||| || | Sbjct 80280 TCTTTTTGGCCCAGTACATCCTCAAAAACCCATGCATCTTACCCTCCTTCACCATCTGCA 80339 Query 120021 GTTGTGCGGCGTTCCA 120036 | ||||| | |||||| Sbjct 80340 GCTGTGCCGAGTTCCA 80355 >seq654 Length=198528 Score = 100 bits (110), Expect = 3e-16 Identities = 177/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTGTCGTGGAGCCCC 119842 ||||| || || ||||| ||||| | ||| |||||||| || ||||| | || Sbjct 167077 TTCATGTACCGAATCTTCCCGAAAATTTCACGCTCCTTCCAGCCTTGATCGTGAATGCCG 167018 Query 119843 GCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTA 119902 || | | ||| | ||| || ||||| ||||| ||||| |||||| | ||| | Sbjct 167017 GCGATCGACCACATGCAACCGACGTACCCGTTCGGATCGCGTCCATCCAGGCTGTACCGA 166958 Query 119903 TCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCAGGAGTCTCGCTCCATTCCAGTA 119960 ||||| | ||||| | || | | || ||| || || || | | |||| ||||||| Sbjct 166957 TCGTTCAGATAGATG--GCCGTTGCAAGCGCTTCCTCTGGCGTTTTGGTCCACTCCAGTA 166900 Query 119961 tttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAA 120020 | ||||| ||||||||||| | || | |||||||| ||||| || ||||| || | Sbjct 166899 TCTTTTTGGCCCAGTACATCCTCAAAAACCCATGCATCTTACCCTCCTTCACCATCTGCA 166840 Query 120021 GTTGTGCGGCGTTCCA 120036 | ||||| | |||||| Sbjct 166839 GCTGTGCCGAGTTCCA 166824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517218317101200