Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 116 3e-21
seq109 116 3e-21
>seq1559
Length=79761
Score = 116 bits (128), Expect = 3e-21
Identities = 240/352 (68%), Gaps = 10/352 (3%)
Strand=Plus/Minus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
|| ||||| || || | ||||| || |||||| | || ||||| || || |||
Sbjct 23311 GGTGACCTAGGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACA 23252
Query 18849 TGTCAATCAAACTATTTACA----GCAAGGAATCGATCAGCTGCAAACTGTTATAGATAC 18904
||||| || ||| ||| | |||||||||||||| || || || || || ||
Sbjct 23251 TGTCACG---ACGATT-ACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACAC 23196
Query 18905 AATTAAAACAAACCCAGAAAGCCGACGAATGATTAT-ATCGTCTTGGAATCCAAAGGATA 18963
| | |||| || || | || || || ||||| | || |||||||||| || |
Sbjct 23195 ATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCG-CTTGGAATCCTTCCGACA 23137
Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTG 19023
| ||| |||| || || || || ||| || ||||||| |||||| | || |
Sbjct 23136 TTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTTGCTGATGGAG 23077
Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083
| | ||||||||| | || ||| |||||| ||| | ||| | || |||||||||||||
Sbjct 23076 AGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACA 23017
Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135
|||| | || |||| || ||| |||| | |||||||| || ||||| ||
Sbjct 23016 TTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTCACTGGACTGAA 22965
>seq109
Length=460762
Score = 116 bits (128), Expect = 3e-21
Identities = 240/352 (68%), Gaps = 10/352 (3%)
Strand=Plus/Plus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
|| ||||| || || | ||||| || |||||| | || ||||| || || |||
Sbjct 284131 GGTGACCTAGGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACA 284190
Query 18849 TGTCAATCAAACTATTTACA----GCAAGGAATCGATCAGCTGCAAACTGTTATAGATAC 18904
||||| || ||| ||| | |||||||||||||| || || || || || ||
Sbjct 284191 TGTCACG---ACGATT-ACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACAC 284246
Query 18905 AATTAAAACAAACCCAGAAAGCCGACGAATGATTAT-ATCGTCTTGGAATCCAAAGGATA 18963
| | |||| || || | || || || ||||| | || |||||||||| || |
Sbjct 284247 ATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCG-CTTGGAATCCTTCCGACA 284305
Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTG 19023
| ||| |||| || || || || ||| || ||||||| |||||| | || |
Sbjct 284306 TTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTTGCTGATGGAG 284365
Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083
| | ||||||||| | || ||| |||||| ||| | ||| | || |||||||||||||
Sbjct 284366 AGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACA 284425
Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135
|||| | || |||| || ||| |||| | |||||||| || ||||| ||
Sbjct 284426 TTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTCACTGGACTGAA 284477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399257679566550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |