Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1559 116 3e-21 seq109 116 3e-21 >seq1559 Length=79761 Score = 116 bits (128), Expect = 3e-21 Identities = 240/352 (68%), Gaps = 10/352 (3%) Strand=Plus/Minus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || ||||| || || | ||||| || |||||| | || ||||| || || ||| Sbjct 23311 GGTGACCTAGGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACA 23252 Query 18849 TGTCAATCAAACTATTTACA----GCAAGGAATCGATCAGCTGCAAACTGTTATAGATAC 18904 ||||| || ||| ||| | |||||||||||||| || || || || || || Sbjct 23251 TGTCACG---ACGATT-ACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACAC 23196 Query 18905 AATTAAAACAAACCCAGAAAGCCGACGAATGATTAT-ATCGTCTTGGAATCCAAAGGATA 18963 | | |||| || || | || || || ||||| | || |||||||||| || | Sbjct 23195 ATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCG-CTTGGAATCCTTCCGACA 23137 Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTG 19023 | ||| |||| || || || || ||| || ||||||| |||||| | || | Sbjct 23136 TTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTTGCTGATGGAG 23077 Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083 | | ||||||||| | || ||| |||||| ||| | ||| | || ||||||||||||| Sbjct 23076 AGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACA 23017 Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 |||| | || |||| || ||| |||| | |||||||| || ||||| || Sbjct 23016 TTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTCACTGGACTGAA 22965 >seq109 Length=460762 Score = 116 bits (128), Expect = 3e-21 Identities = 240/352 (68%), Gaps = 10/352 (3%) Strand=Plus/Plus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || ||||| || || | ||||| || |||||| | || ||||| || || ||| Sbjct 284131 GGTGACCTAGGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACA 284190 Query 18849 TGTCAATCAAACTATTTACA----GCAAGGAATCGATCAGCTGCAAACTGTTATAGATAC 18904 ||||| || ||| ||| | |||||||||||||| || || || || || || Sbjct 284191 TGTCACG---ACGATT-ACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACAC 284246 Query 18905 AATTAAAACAAACCCAGAAAGCCGACGAATGATTAT-ATCGTCTTGGAATCCAAAGGATA 18963 | | |||| || || | || || || ||||| | || |||||||||| || | Sbjct 284247 ATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCG-CTTGGAATCCTTCCGACA 284305 Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTG 19023 | ||| |||| || || || || ||| || ||||||| |||||| | || | Sbjct 284306 TTCCCAACATGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTTGCTGATGGAG 284365 Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083 | | ||||||||| | || ||| |||||| ||| | ||| | || ||||||||||||| Sbjct 284366 AGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACA 284425 Query 19084 TTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 |||| | || |||| || ||| |||| | |||||||| || ||||| || Sbjct 284426 TTGCCAGCTACTCACTGCTGACCCACATGATCGCGCATGTCACTGGACTGAA 284477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399257679566550