Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq561 111 1e-19 seq843 96.9 3e-15 seq701 96.9 3e-15 seq98 96.9 3e-15 seq2250 95.1 1e-14 >seq561 Length=219668 Score = 111 bits (122), Expect = 1e-19 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||| | ||||| ||||| |||||||||||||| | | Sbjct 140034 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 139975 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||| ||| ||||| ||| | || || | |||||| ||| ||| Sbjct 139974 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 139915 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| ||||| | ||| || || || || Sbjct 139914 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACC 139855 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCTCTT 21187 || | ||| |||||||| ||||| | || || ||||| |||||||||||| | || || Sbjct 139854 TCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTTGCAGCTGTT 139796 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||| | ||||| ||||| |||||||||||||| | | Sbjct 140262 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140203 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||| ||| ||||| ||| | || || | |||||| ||| ||| Sbjct 140202 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 140143 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| ||||| | ||| || || || || Sbjct 140142 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACC 140083 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||| | ||| ||||| || || ||||| Sbjct 140082 TCAAGGGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTGCAT 140036 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||| | ||||| ||||| |||||||||||||| | | Sbjct 140490 CCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140431 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||| || ||||| ||| | || || | |||||| ||| ||| Sbjct 140430 AGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 140371 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| ||||| | ||| || || || || Sbjct 140370 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACC 140311 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| ||||| | || ||||| || || ||||| Sbjct 140310 TCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 140264 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | | |||| ||| | ||||| ||||| |||||||||||||| | Sbjct 140720 TTCCACCACGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGG 140661 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 |||||| | | || |||| ||| ||||| ||| | || || | |||||| || || Sbjct 140660 ACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGG 140601 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||||| ||||| | ||| || || || || Sbjct 140600 GGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGA 140541 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||| | || ||||| || || ||||| Sbjct 140540 CCTCAAGGGTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCAT 140492 >seq843 Length=160513 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || |||||||| || ||||| ||||| | | Sbjct 68837 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 68896 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| || || || | || || | |||||| || || Sbjct 68897 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 68956 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| ||||| || || Sbjct 68957 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACC 69016 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||||||||||| || || | |||||||| || || ||||| ||| Sbjct 69017 TCAAGAGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 69067 >seq701 Length=187196 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || |||||||| || ||||| ||||| | | Sbjct 176850 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 176791 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| || || || | || || | |||||| || || Sbjct 176790 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 176731 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| ||||| || || Sbjct 176730 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACC 176671 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||||||||||| || || | |||||||| || || ||||| ||| Sbjct 176670 TCAAGAGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 176620 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || |||||||| || ||||| ||||| | | Sbjct 183619 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 183560 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| || || || | || || | |||||| || || Sbjct 183559 AGGGTGCGTCCGTCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGG 183500 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| ||||| || || Sbjct 183499 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACC 183440 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||||||||||| || || | |||||||| || || ||||| ||| Sbjct 183439 TCAAGAGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 183389 >seq98 Length=483913 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| ||||| || |||||||| || ||||| ||||| | | Sbjct 464716 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 464657 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| || || || | || | | |||||| || || Sbjct 464656 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 464597 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | ||| || || ||||| Sbjct 464596 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACC 464537 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 |||| || ||||||||||| || ||||| || ||||| |||||||| |||| Sbjct 464536 TCCAACGTGATGGTCTTGCCAGTCAACGTCTTCACAAAGATTTGCATCCTGAA 464484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||||||||| || || | || |||| || | || |||||||| |||||||| ||||| Sbjct 465638 GTTTCCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTC 465579 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | ||| || | | ||||| ||||| || || || | || | | |||||| || Sbjct 465578 GGACAGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGG 465519 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | || |||||||| |||||| ||||| | ||| || || |||||| Sbjct 465518 AGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTC 465459 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || | ||| || || || || ||||| Sbjct 465458 GACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 >seq2250 Length=42400 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||| | ||||| ||||| |||||||| ||||| | |||||| | | || Sbjct 17049 AGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCT 16990 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| ||| | || || | |||||| || || | |||||||| || Sbjct 16989 TCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCC 16930 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| |||||| | ||| || || ||||| || | || |||||| Sbjct 16929 TGGATCTTGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGACCTCGAGTGTGATGGTC 16870 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | ||||| || || || ||||| Sbjct 16869 TTGCCCGTGAGTGTTTTCACGAAAATCTGCAT 16838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421998849492440