Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq98 134 1e-26 seq561 107 2e-18 seq843 100 2e-16 seq701 100 2e-16 >seq98 Length=483913 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| |||||||||||| ||| || | || || Sbjct 464698 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 464639 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| ||||| ||||| || || ||||| | ||||||||||||| Sbjct 464638 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 464579 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||| ||||||| || || |||||| Sbjct 464578 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTCTTG 464519 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||||||||||||||||| Sbjct 464518 CCAGTCAACGTCTTCACAAAGATTTGCAT 464490 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| |||||||||||| ||| || | || || Sbjct 464926 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 464867 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| ||||| ||||| || || ||||| | ||||||||||||| Sbjct 464866 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 464807 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||| ||||||| || || |||||| Sbjct 464806 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTCTTG 464747 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| ||||| Sbjct 464746 CCAGTCAGCGTCTTCACGAAGATCTGCAT 464718 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||||||||||||||||||| ||| || | || || Sbjct 465616 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 465557 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| ||||| ||||| || || ||||| | ||||||||||||| Sbjct 465556 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 465497 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||||| || || |||||| Sbjct 465496 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTG 465437 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| ||||| Sbjct 465436 CCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||||||| ||| || | || || Sbjct 465154 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 465095 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| ||||| ||||| || || ||||| | ||||||||||||| Sbjct 465094 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 465035 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||||| || || |||||| Sbjct 465034 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTG 464975 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| ||||| Sbjct 464974 CCAGTCAGCGTCTTCACGAAGATCTGCAT 464946 >seq561 Length=219668 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| |||||||||||||| |||||| ||| |||| | || ||| Sbjct 140016 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 139957 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || ||||| || |||| ||||| || || || || | || ||||||||| | Sbjct 139956 AACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGA 139897 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| || ||||| | ||| || ||||| Sbjct 139896 ATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAGGGTGATGGTCTTT 139837 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341 || |||||||||||||||||||||||||| |||| Sbjct 139836 CCGGTCAGAGTCTTCACAAAGATTTGCATTTTGC 139803 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| |||||||||||||| |||||| ||| |||| | || ||| Sbjct 140472 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 140413 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| || ||||| || |||| ||||| || || || || | || ||||||||| | Sbjct 140412 AATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGA 140353 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| || ||||||| ||| || ||||| Sbjct 140352 ATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATGGTCTTT 140293 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||||||||| || ||||| |||||| Sbjct 140292 CCGGTCAGAGTCTTGACGAAGATCTGCATG 140263 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| |||||||||||||| |||||| ||| |||| | || ||| Sbjct 140244 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 140185 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || ||||| || |||| ||||| || || || || | || ||||||||| | Sbjct 140184 AACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGA 140125 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | |||| || ||||| | ||| || ||||| Sbjct 140124 ATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTCTTT 140065 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| ||||| || ||||| |||||| Sbjct 140064 CCGGTCAGCGTCTTGACGAAGATCTGCATG 140035 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||| || || ||| |||||||||||||| |||||| ||| |||| | || Sbjct 140703 AAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 140644 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| || || ||||| || || | ||||| || || || || | || ||||||||| Sbjct 140643 TCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCC 140584 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||| || | | | | |||| || ||||| | ||| || ||| Sbjct 140583 TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTC 140524 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || ||||| ||||| || ||||| |||||| Sbjct 140523 TTTCCGGTCAGTGTCTTGACGAAGATCTGCATG 140491 >seq843 Length=160513 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| |||||||||||| ||| ||| |||| ||| Sbjct 68855 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 68914 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || ||||| || | |||||||||||| Sbjct 68915 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGG 68974 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||| || ||||| | ||||| ||||| Sbjct 68975 ATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTA 69034 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| || || || || ||||| ||||| ||| Sbjct 69035 CCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 69067 >seq701 Length=187196 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| |||||||||||| ||| ||| |||| ||| Sbjct 176832 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 176773 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || ||||| || | |||||||||||| Sbjct 176772 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGG 176713 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||| || ||||| | ||||| ||||| Sbjct 176712 ATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTA 176653 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| || || || || ||||| ||||| ||| Sbjct 176652 CCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 176620 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| |||||||||||| ||| ||| |||| ||| Sbjct 183601 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 183542 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || ||||| || | |||||||||||| Sbjct 183541 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGG 183482 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||| || ||||| | ||||| ||||| Sbjct 183481 ATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTA 183422 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| || || || || ||||| ||||| ||| Sbjct 183421 CCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 183389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394831610212390