Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq98 134 1e-26
seq561 107 2e-18
seq843 100 2e-16
seq701 100 2e-16
>seq98
Length=483913
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||| || ||||||||| |||||||||||| ||| || | || ||
Sbjct 464698 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 464639
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| ||||| ||||| || || ||||| | |||||||||||||
Sbjct 464638 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 464579
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| | ||| ||||||| || || ||||||
Sbjct 464578 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTCTTG 464519
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||||||||||||||||||
Sbjct 464518 CCAGTCAACGTCTTCACAAAGATTTGCAT 464490
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||| || ||||||||| |||||||||||| ||| || | || ||
Sbjct 464926 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 464867
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| ||||| ||||| || || ||||| | |||||||||||||
Sbjct 464866 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 464807
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| | ||| ||||||| || || ||||||
Sbjct 464806 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACCTCCAACGTGATGGTCTTG 464747
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||| ||||| |||||
Sbjct 464746 CCAGTCAGCGTCTTCACGAAGATCTGCAT 464718
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || |||||||||||||||||||||| ||| || | || ||
Sbjct 465616 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 465557
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| ||||| ||||| || || ||||| | |||||||||||||
Sbjct 465556 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 465497
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||| ||||||| || || ||||||
Sbjct 465496 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTG 465437
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||| ||||| |||||
Sbjct 465436 CCAGTCAGCGTCTTCACGAAGATCTGCAT 465408
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||||||| ||| || | || ||
Sbjct 465154 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 465095
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| ||||| ||||| || || ||||| | |||||||||||||
Sbjct 465094 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 465035
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||| ||||||| || || ||||||
Sbjct 465034 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTG 464975
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||| ||||| |||||
Sbjct 464974 CCAGTCAGCGTCTTCACGAAGATCTGCAT 464946
>seq561
Length=219668
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| || || ||| |||||||||||||| |||||| ||| |||| | || |||
Sbjct 140016 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 139957
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || ||||| || |||| ||||| || || || || | || ||||||||| |
Sbjct 139956 AACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGA 139897
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| || ||||| | ||| || |||||
Sbjct 139896 ATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAGGGTGATGGTCTTT 139837
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341
|| |||||||||||||||||||||||||| ||||
Sbjct 139836 CCGGTCAGAGTCTTCACAAAGATTTGCATTTTGC 139803
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| || || ||| |||||||||||||| |||||| ||| |||| | || |||
Sbjct 140472 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 140413
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| ||| || ||||| || |||| ||||| || || || || | || ||||||||| |
Sbjct 140412 AATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGA 140353
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| || ||||||| ||| || |||||
Sbjct 140352 ATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATGGTCTTT 140293
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||||||||| || ||||| ||||||
Sbjct 140292 CCGGTCAGAGTCTTGACGAAGATCTGCATG 140263
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| || || ||| |||||||||||||| |||||| ||| |||| | || |||
Sbjct 140244 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 140185
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || ||||| || |||| ||||| || || || || | || ||||||||| |
Sbjct 140184 AACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGA 140125
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | |||| || ||||| | ||| || |||||
Sbjct 140124 ATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTCTTT 140065
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||| ||||| || ||||| ||||||
Sbjct 140064 CCGGTCAGCGTCTTGACGAAGATCTGCATG 140035
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||| || || ||| |||||||||||||| |||||| ||| |||| | ||
Sbjct 140703 AAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 140644
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|||| || || ||||| || || | ||||| || || || || | || |||||||||
Sbjct 140643 TCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCC 140584
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | | |||| || ||||| | ||| || |||
Sbjct 140583 TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTC 140524
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || ||||| ||||| || ||||| ||||||
Sbjct 140523 TTTCCGGTCAGTGTCTTGACGAAGATCTGCATG 140491
>seq843
Length=160513
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||||||| ||| ||| |||| |||
Sbjct 68855 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 68914
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| || ||||| || | ||||||||||||
Sbjct 68915 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGG 68974
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | ||| || ||||| | ||||| |||||
Sbjct 68975 ATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTA 69034
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || || || || ||||| ||||| |||
Sbjct 69035 CCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 69067
>seq701
Length=187196
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||||||| ||| ||| |||| |||
Sbjct 176832 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 176773
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| || ||||| || | ||||||||||||
Sbjct 176772 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGG 176713
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | ||| || ||||| | ||||| |||||
Sbjct 176712 ATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTA 176653
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || || || || ||||| ||||| |||
Sbjct 176652 CCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 176620
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||||||| ||| ||| |||| |||
Sbjct 183601 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 183542
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| || ||||| || | ||||||||||||
Sbjct 183541 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGG 183482
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | ||| || ||||| | ||||| |||||
Sbjct 183481 ATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTA 183422
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || || || || ||||| ||||| |||
Sbjct 183421 CCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 183389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394831610212390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |