Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq561 100 2e-16
seq2250 89.7 4e-13
>seq561
Length=219668
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || || || ||||| || |||||||| ||||||| || || || ||||
Sbjct 140019 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 139960
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
||||| || ||||| ||| |||| || | || |||||| ||| | |||||||| ||
Sbjct 139959 TCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 139900
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
||| | ||| || | | | ||||| || ||| |||| ||||||| |
Sbjct 139899 TGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAGGGTGATGGTC 139840
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|| ||||||| || || ||||| |||||||||||
Sbjct 139839 TTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTT 139805
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || || || ||||| || |||||||| ||||||| || || || ||||
Sbjct 140475 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 140416
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||||||| ||||| ||| |||| || | || |||||| ||| | |||||||| ||
Sbjct 140415 TCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 140356
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
||| | ||| || | | | ||||| || ||| || | ||||||| |
Sbjct 140355 TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATGGTC 140296
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| ||||||| || || || || || |||||
Sbjct 140295 TTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 140264
>seq2250
Length=42400
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || |||| || |||| ||||| || ||||| || |||||||||||||||| |
Sbjct 17064 CCACCGCGGAGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAC 17005
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || || |||||||| || ||||| ||| |||| || | || ||||| ||
Sbjct 17004 AGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGA 16945
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| ||||||||||| || | | || || || | | | ||||| ||||||
Sbjct 16944 ATTCCTTCCTTATCCTGGATCT-TGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGAC 16886
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | |||||| | ||||| || | |||||| || ||||| |||||
Sbjct 16885 CTCGAGTGTGATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCAT 16838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379110109529550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |