Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1559 134 3e-26
seq109 134 3e-26
seq569 96.9 7e-15
seq1541 91.5 3e-13
>seq1559
Length=79761
Score = 134 bits (148), Expect = 3e-26
Identities = 224/321 (70%), Gaps = 2/321 (1%)
Strand=Plus/Minus
Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCC 35464
||||| || ||||| || || |||||||| |||||||| || | || ||| |
Sbjct 23302 GGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACATGTCACGAC 23243
Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAAT 35524
||||| || || || || || ||||| ||||| || | | | || ||| | | |||
Sbjct 23242 GATTACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACACATTGAAAAACAAT 23183
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| | ||| | |||| ||||||| || ||||||||| || ||| | |||||
Sbjct 23182 CCTTACGATCGTCGGATCATTATGAGCGCTTGGAATCCTTCCGACATTCCCAACATGGCC 23123
Query 35585 CTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643
|| || || |||||| || || | || |||| || ||| ||||||| |||| |||||
Sbjct 23122 CTGCCGCCGTGCCAC-TGTTTGGCACAGTTTTTCGTTGCTGATGGAGAGCTGTCCTGCCA 23064
Query 35644 GTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTC 35703
||||||||||| | ||||| || |||||||| || ||||| ||||| |||||
Sbjct 23063 AATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACATTGCCAGCTACTC 23004
Query 35704 TCTTCTGACTCATCTGATGGC 35724
|| ||||| || |||| ||
Sbjct 23003 ACTGCTGACCCACATGATCGC 22983
>seq109
Length=460762
Score = 134 bits (148), Expect = 3e-26
Identities = 224/321 (70%), Gaps = 2/321 (1%)
Strand=Plus/Plus
Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCC 35464
||||| || ||||| || || |||||||| |||||||| || | || ||| |
Sbjct 284140 GGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACATGTCACGAC 284199
Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAAT 35524
||||| || || || || || ||||| ||||| || | | | || ||| | | |||
Sbjct 284200 GATTACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACACATTGAAAAACAAT 284259
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| | ||| | |||| ||||||| || ||||||||| || ||| | |||||
Sbjct 284260 CCTTACGATCGTCGGATCATTATGAGCGCTTGGAATCCTTCCGACATTCCCAACATGGCC 284319
Query 35585 CTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643
|| || || |||||| || || | || |||| || ||| ||||||| |||| |||||
Sbjct 284320 CTGCCGCCGTGCCAC-TGTTTGGCACAGTTTTTCGTTGCTGATGGAGAGCTGTCCTGCCA 284378
Query 35644 GTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTC 35703
||||||||||| | ||||| || |||||||| || ||||| ||||| |||||
Sbjct 284379 AATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACATTGCCAGCTACTC 284438
Query 35704 TCTTCTGACTCATCTGATGGC 35724
|| ||||| || |||| ||
Sbjct 284439 ACTGCTGACCCACATGATCGC 284459
>seq569
Length=217393
Score = 96.9 bits (106), Expect = 7e-15
Identities = 253/383 (66%), Gaps = 10/383 (3%)
Strand=Plus/Plus
Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA----TTTGGCGGA 101910
|||||||||| | ||||| |||| ||||| ||||| || | ||||||| |
Sbjct 206186 AAGAAGAAGGCTGACTGGGCCCTTAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCG-A 206244
Query 101911 ACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCAT 101970
|| | || || ||||| || || || || |||||||| || ||| || || |||||
Sbjct 206245 ACGTGTGGTCGCGTTTGCGGCCGTCGAGGGTATCTTCTTCAGCGGTAGCTTTGCGTCCAT 206304
Query 101971 TTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030
||||||| | ||||| | || | |||| || || || | ||| || ||| | |||||
Sbjct 206305 TTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGGCTGACGTTCTCGAACGAGCTGATTTC 206364
Query 102031 TAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG- 102089
| ||||| || | ||| |||| || || ||| | |||| ||| | || ||
Sbjct 206365 GCGCGACGAGGGATTGCATTGCGATTTCGCGTGCCTAATGTT----CAGGTATCTGGTGC 206420
Query 102090 ATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149
| | || || | || | | || || || ||| || || || || ||||
Sbjct 206421 AGAAGCCGTCGAAGGAGCGCGTGACGGAGATCATCCGTGATGCGGTAGTGATCGAGCAAG 206480
Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209
||||| | || ||||||| || | | | || ||||||||| | ||||| ||
Sbjct 206481 AATTTTTGACGAAAGCCCTGCCGGTGGATATGCTCGGCATGAACTGCGAACTGATGTCCC 206540
Query 102210 AGTACATTGAATTTGTGGCAGAT 102232
|||||||||| |||||||| |||
Sbjct 206541 AGTACATTGAGTTTGTGGCCGAT 206563
>seq1541
Length=81579
Score = 91.5 bits (100), Expect = 3e-13
Identities = 252/383 (66%), Gaps = 10/383 (3%)
Strand=Plus/Plus
Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA----TTTGGCGGA 101910
|||||||||| | ||||| |||| ||||| ||||| || | ||||||| |
Sbjct 59506 AAGAAGAAGGCCGACTGGGCCCTTAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCG-A 59564
Query 101911 ACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCAT 101970
|| | || || |||||||| || || || |||||||| || || || || |||||
Sbjct 59565 ACGTGTGGTCGCGTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCAGCTTTGCGTCCAT 59624
Query 101971 TTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030
||||||| | ||||| | || | |||| || || || | ||| || ||| | |||||
Sbjct 59625 TTTCTGGCTGAAGAAGCGTGGCCTGATGCCCGGGCTGACGTTCTCGAACGAGCTGATTTC 59684
Query 102031 TAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG- 102089
| ||||| || | ||| |||| || || ||| | |||| ||| | || ||
Sbjct 59685 GCGCGACGAGGGATTGCATTGCGATTTCGCGTGCCTAATGTT----CAGGTATCTGGTGC 59740
Query 102090 ATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149
| | || || | || | | || || || ||| || || || || ||||
Sbjct 59741 AGAAGCCGTCGAAGGAGCGCGTGACGGAGATCATCCGTGATGCGGTAGTGATCGAGCAAG 59800
Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209
||||| | || ||||||| || | | | || ||||||||| | ||||| |
Sbjct 59801 AATTTTTGACGAAAGCCCTGCCAGTGGATATGCTCGGCATGAACTGCGAACTGATGTCGC 59860
Query 102210 AGTACATTGAATTTGTGGCAGAT 102232
|||||||||| |||||||| |||
Sbjct 59861 AGTACATTGAGTTTGTGGCCGAT 59883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 988942567113450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |