Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1559 134 3e-26 seq109 134 3e-26 seq569 96.9 7e-15 seq1541 91.5 3e-13 >seq1559 Length=79761 Score = 134 bits (148), Expect = 3e-26 Identities = 224/321 (70%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCC 35464 ||||| || ||||| || || |||||||| |||||||| || | || ||| | Sbjct 23302 GGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACATGTCACGAC 23243 Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAAT 35524 ||||| || || || || || ||||| ||||| || | | | || ||| | | ||| Sbjct 23242 GATTACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACACATTGAAAAACAAT 23183 Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584 || | ||| | |||| ||||||| || ||||||||| || ||| | ||||| Sbjct 23182 CCTTACGATCGTCGGATCATTATGAGCGCTTGGAATCCTTCCGACATTCCCAACATGGCC 23123 Query 35585 CTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643 || || || |||||| || || | || |||| || ||| ||||||| |||| ||||| Sbjct 23122 CTGCCGCCGTGCCAC-TGTTTGGCACAGTTTTTCGTTGCTGATGGAGAGCTGTCCTGCCA 23064 Query 35644 GTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTC 35703 ||||||||||| | ||||| || |||||||| || ||||| ||||| ||||| Sbjct 23063 AATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACATTGCCAGCTACTC 23004 Query 35704 TCTTCTGACTCATCTGATGGC 35724 || ||||| || |||| || Sbjct 23003 ACTGCTGACCCACATGATCGC 22983 >seq109 Length=460762 Score = 134 bits (148), Expect = 3e-26 Identities = 224/321 (70%), Gaps = 2/321 (1%) Strand=Plus/Plus Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCC 35464 ||||| || ||||| || || |||||||| |||||||| || | || ||| | Sbjct 284140 GGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAACATGTCACGAC 284199 Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAAT 35524 ||||| || || || || || ||||| ||||| || | | | || ||| | | ||| Sbjct 284200 GATTACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCGACACATTGAAAAACAAT 284259 Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584 || | ||| | |||| ||||||| || ||||||||| || ||| | ||||| Sbjct 284260 CCTTACGATCGTCGGATCATTATGAGCGCTTGGAATCCTTCCGACATTCCCAACATGGCC 284319 Query 35585 CTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643 || || || |||||| || || | || |||| || ||| ||||||| |||| ||||| Sbjct 284320 CTGCCGCCGTGCCAC-TGTTTGGCACAGTTTTTCGTTGCTGATGGAGAGCTGTCCTGCCA 284378 Query 35644 GTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTC 35703 ||||||||||| | ||||| || |||||||| || ||||| ||||| ||||| Sbjct 284379 AATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTTCAACATTGCCAGCTACTC 284438 Query 35704 TCTTCTGACTCATCTGATGGC 35724 || ||||| || |||| || Sbjct 284439 ACTGCTGACCCACATGATCGC 284459 >seq569 Length=217393 Score = 96.9 bits (106), Expect = 7e-15 Identities = 253/383 (66%), Gaps = 10/383 (3%) Strand=Plus/Plus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA----TTTGGCGGA 101910 |||||||||| | ||||| |||| ||||| ||||| || | ||||||| | Sbjct 206186 AAGAAGAAGGCTGACTGGGCCCTTAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCG-A 206244 Query 101911 ACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCAT 101970 || | || || ||||| || || || || |||||||| || ||| || || ||||| Sbjct 206245 ACGTGTGGTCGCGTTTGCGGCCGTCGAGGGTATCTTCTTCAGCGGTAGCTTTGCGTCCAT 206304 Query 101971 TTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030 ||||||| | ||||| | || | |||| || || || | ||| || ||| | ||||| Sbjct 206305 TTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGGCTGACGTTCTCGAACGAGCTGATTTC 206364 Query 102031 TAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG- 102089 | ||||| || | ||| |||| || || ||| | |||| ||| | || || Sbjct 206365 GCGCGACGAGGGATTGCATTGCGATTTCGCGTGCCTAATGTT----CAGGTATCTGGTGC 206420 Query 102090 ATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149 | | || || | || | | || || || ||| || || || || |||| Sbjct 206421 AGAAGCCGTCGAAGGAGCGCGTGACGGAGATCATCCGTGATGCGGTAGTGATCGAGCAAG 206480 Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209 ||||| | || ||||||| || | | | || ||||||||| | ||||| || Sbjct 206481 AATTTTTGACGAAAGCCCTGCCGGTGGATATGCTCGGCATGAACTGCGAACTGATGTCCC 206540 Query 102210 AGTACATTGAATTTGTGGCAGAT 102232 |||||||||| |||||||| ||| Sbjct 206541 AGTACATTGAGTTTGTGGCCGAT 206563 >seq1541 Length=81579 Score = 91.5 bits (100), Expect = 3e-13 Identities = 252/383 (66%), Gaps = 10/383 (3%) Strand=Plus/Plus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA----TTTGGCGGA 101910 |||||||||| | ||||| |||| ||||| ||||| || | ||||||| | Sbjct 59506 AAGAAGAAGGCCGACTGGGCCCTTAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCG-A 59564 Query 101911 ACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCAT 101970 || | || || |||||||| || || || |||||||| || || || || ||||| Sbjct 59565 ACGTGTGGTCGCGTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCAGCTTTGCGTCCAT 59624 Query 101971 TTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030 ||||||| | ||||| | || | |||| || || || | ||| || ||| | ||||| Sbjct 59625 TTTCTGGCTGAAGAAGCGTGGCCTGATGCCCGGGCTGACGTTCTCGAACGAGCTGATTTC 59684 Query 102031 TAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG- 102089 | ||||| || | ||| |||| || || ||| | |||| ||| | || || Sbjct 59685 GCGCGACGAGGGATTGCATTGCGATTTCGCGTGCCTAATGTT----CAGGTATCTGGTGC 59740 Query 102090 ATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAG 102149 | | || || | || | | || || || ||| || || || || |||| Sbjct 59741 AGAAGCCGTCGAAGGAGCGCGTGACGGAGATCATCCGTGATGCGGTAGTGATCGAGCAAG 59800 Query 102150 AATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCC 102209 ||||| | || ||||||| || | | | || ||||||||| | ||||| | Sbjct 59801 AATTTTTGACGAAAGCCCTGCCAGTGGATATGCTCGGCATGAACTGCGAACTGATGTCGC 59860 Query 102210 AGTACATTGAATTTGTGGCAGAT 102232 |||||||||| |||||||| ||| Sbjct 59861 AGTACATTGAGTTTGTGGCCGAT 59883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988942567113450