Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq591 192 5e-44 seq368 188 7e-43 >seq591 Length=212830 Score = 192 bits (212), Expect = 5e-44 Identities = 530/805 (66%), Gaps = 13/805 (2%) Strand=Plus/Minus Query 36823 TTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATA 36882 || |||| || ||| ||||| || ||||| || |||| | |||| |||||||| || || Sbjct 137491 TTCGTTCGCAAATAGTACATGCCTGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATC 137432 Query 36883 CTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCT 36942 ||||| || ||| | || | | | | ||| | | ||||| ||||| Sbjct 137431 GACGTCAGCTTGCTGTAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCG 137372 Query 36943 ATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGA---GATATCTCCCAA 36999 ||||||||||| | ||||| ||||||| || ||| ||| | || |||||||| Sbjct 137371 ATAAACGCACCCCGATCGGCAGCCATTT---TGATGCATGTTTTAACCGAAATCTCCCAC 137315 Query 37000 ACCGTTTTATATATTTGTTTTATATTATCTGGTA--AATCTAAATG--TTGAATAGAACC 37055 |||||||| || | | ||| | | |||| || | |||| ||||| || || Sbjct 137314 ACCGTTTTGTAGAGGTCCCGTATTTCCTGCGGTATCGAT-TCAATGCTCTGAATCGAGCC 137256 Query 37056 ATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTC 37115 ||||| ||| |||| ||||| |||||| || ||||| | | | | | || Sbjct 137255 ATTATTGGACAAAATTTCGTTCTTCATGTCAAGATCCCACAGACCCATCGCTGTCAAATC 137196 Query 37116 TCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATAT 37175 | || ||||| | || || ||||| || || || || | ||| | | | || | Sbjct 137195 TTGCAGCAGGTGATGGTTCACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAAC 137136 Query 37176 ATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGT 37235 ||| || || || |||| |||||| || |||| ||||| || | || || || || Sbjct 137135 GTTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGT 137076 Query 37236 AGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAG 37295 ||||| ||||| | || || ||| | | || || | |||| ||| ||| || Sbjct 137075 CGGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTTTCTCTTTCAG 137016 Query 37296 TTCATTCCAATCCCATAAATCTGTTGGGTTCTTT-AACCACATATCATATTGTAGAATAC 37354 ||| ||| | ||| | ||| | | |||||||| |||||| || || |||| || | Sbjct 137015 TTCGGCCCAGTTCCAAAGATCCG-TCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGC 136957 Query 37355 CTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGC 37414 |||| ||| | ||| | | | ||||| || || || |||| | || | || | Sbjct 136956 CTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTCAC 136897 Query 37415 AACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTG 37474 | || | ||| |||||| |||| || || ||||| || ||||| ||| | ||| | Sbjct 136896 AGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTCAGCTTTTGGG 136837 Query 37475 CTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACAC 37534 ||||||| || ||| ||| ||||| || ||| || || |||| |||| |||||||||| Sbjct 136836 CTTCTTCACTTTCGTATGGATAGCGCATTAAAATGAATGCATCTGCCATGCCCTGAACAC 136777 Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAAT 37594 | ||||| || || ||||| | | ||||| | | || || ||||| |||| Sbjct 136776 CAATACCGATCGGCCTATGGCGCATGTTAGAGCGCTTTGCCTCCGGTACGGGATAGTAAT 136717 Query 37595 TGATATCTATTATTTTATTTAGATT 37619 | || || || ||||| || ||||| Sbjct 136716 TTATGTCGATGATTTTGTTCAGATT 136692 >seq368 Length=285863 Score = 188 bits (208), Expect = 7e-43 Identities = 530/805 (66%), Gaps = 19/805 (2%) Strand=Plus/Minus Query 36823 TTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATA 36882 || |||| || ||| ||||| || ||||| || |||| | |||| |||||||| || || Sbjct 115353 TTCGTTCGCAAATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATC 115294 Query 36883 CTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCT 36942 ||||| || ||| | || | | | | ||| | | ||||| ||||| Sbjct 115293 GACGTCAGCTTGCTGTAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCG 115234 Query 36943 ATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGA---GATATCTCCCAA 36999 ||||||||||| | ||||| ||||||| || ||| ||| | || |||||||| Sbjct 115233 ATAAACGCACCCCGATCGGCAGCCATTT---TGATGCATGTTTTAACCGAAATCTCCCAC 115177 Query 37000 ACCGTTTTATATATTTGTTTTATATTATCTGGTA--AATCTAAATG--TTGAATAGAACC 37055 |||||||| || | | ||| | | |||| || | |||| ||||| || || Sbjct 115176 ACCGTTTTGTAGAGGTCCCGTATTTCCTGCGGTATCGAT-TCAATGCTCTGAATCGAGCC 115118 Query 37056 ATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTC 37115 ||||| ||| |||| ||||| |||||| || ||||| | | | | | || Sbjct 115117 ATTATTGGACAAAATTTCGTTCTTCATGTCAAGATCCCACAGACCCATCGCTGTCAAATC 115058 Query 37116 TCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATAT 37175 | || ||||| | || || ||||| || || || || | ||| | | | || | Sbjct 115057 TTGCAGCAGGTGATGGTTCACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAAC 114998 Query 37176 ATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGT 37235 ||| || || || |||| |||||| || |||| ||||| || | || || || || Sbjct 114997 GTTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGT 114938 Query 37236 AGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAG 37295 ||||| ||||| | || || ||| | | || || | |||| ||| ||| || Sbjct 114937 CGGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTTTCTCTTTCAG 114878 Query 37296 TTCATTCCAATCCCATAAATCTGTTGGGTTCTTT-AACCACATATCATATTGTAGAATAC 37354 ||| ||| | ||| | ||| | | |||||||| |||||| || || |||| || | Sbjct 114877 TTCGGCCCAGTTCCAAAGATCCG-TCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGC 114819 Query 37355 CTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGC 37414 |||| ||| | ||| | | | ||||| || || || |||| | || | || | Sbjct 114818 CTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTCAC 114759 Query 37415 AACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTG 37474 | || | ||| |||||| |||| || || ||||| || ||||| ||| | ||| | Sbjct 114758 AGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTCAGCTTTTGGG 114699 Query 37475 CTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACAC 37534 ||||||| || ||| ||| ||| | || ||| || || |||| |||| |||||||||| Sbjct 114698 CTTCTTCACTTTCGTATGGATAACGCATTAAAATGAATGCATCTGCCATGCCCTGAACAC 114639 Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAAT 37594 ||||||| || || ||||| | | ||| | || || | | | ||||| |||| Sbjct 114638 CGATACCGATCGGCCTATGGCGCATGTTA-----AAGCGCTT-TGCCGCCGGATAGTAAT 114585 Query 37595 TGATATCTATTATTTTATTTAGATT 37619 | || || || ||||| || ||||| Sbjct 114584 TTATGTCGATGATTTTGTTCAGATT 114560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468228516629600