Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq591 192 5e-44
seq368 188 7e-43
>seq591
Length=212830
Score = 192 bits (212), Expect = 5e-44
Identities = 530/805 (66%), Gaps = 13/805 (2%)
Strand=Plus/Minus
Query 36823 TTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATA 36882
|| |||| || ||| ||||| || ||||| || |||| | |||| |||||||| || ||
Sbjct 137491 TTCGTTCGCAAATAGTACATGCCTGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATC 137432
Query 36883 CTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCT 36942
||||| || ||| | || | | | | ||| | | ||||| |||||
Sbjct 137431 GACGTCAGCTTGCTGTAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCG 137372
Query 36943 ATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGA---GATATCTCCCAA 36999
||||||||||| | ||||| ||||||| || ||| ||| | || ||||||||
Sbjct 137371 ATAAACGCACCCCGATCGGCAGCCATTT---TGATGCATGTTTTAACCGAAATCTCCCAC 137315
Query 37000 ACCGTTTTATATATTTGTTTTATATTATCTGGTA--AATCTAAATG--TTGAATAGAACC 37055
|||||||| || | | ||| | | |||| || | |||| ||||| || ||
Sbjct 137314 ACCGTTTTGTAGAGGTCCCGTATTTCCTGCGGTATCGAT-TCAATGCTCTGAATCGAGCC 137256
Query 37056 ATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTC 37115
||||| ||| |||| ||||| |||||| || ||||| | | | | | ||
Sbjct 137255 ATTATTGGACAAAATTTCGTTCTTCATGTCAAGATCCCACAGACCCATCGCTGTCAAATC 137196
Query 37116 TCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATAT 37175
| || ||||| | || || ||||| || || || || | ||| | | | || |
Sbjct 137195 TTGCAGCAGGTGATGGTTCACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAAC 137136
Query 37176 ATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGT 37235
||| || || || |||| |||||| || |||| ||||| || | || || || ||
Sbjct 137135 GTTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGT 137076
Query 37236 AGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAG 37295
||||| ||||| | || || ||| | | || || | |||| ||| ||| ||
Sbjct 137075 CGGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTTTCTCTTTCAG 137016
Query 37296 TTCATTCCAATCCCATAAATCTGTTGGGTTCTTT-AACCACATATCATATTGTAGAATAC 37354
||| ||| | ||| | ||| | | |||||||| |||||| || || |||| || |
Sbjct 137015 TTCGGCCCAGTTCCAAAGATCCG-TCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGC 136957
Query 37355 CTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGC 37414
|||| ||| | ||| | | | ||||| || || || |||| | || | || |
Sbjct 136956 CTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTCAC 136897
Query 37415 AACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTG 37474
| || | ||| |||||| |||| || || ||||| || ||||| ||| | ||| |
Sbjct 136896 AGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTCAGCTTTTGGG 136837
Query 37475 CTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACAC 37534
||||||| || ||| ||| ||||| || ||| || || |||| |||| ||||||||||
Sbjct 136836 CTTCTTCACTTTCGTATGGATAGCGCATTAAAATGAATGCATCTGCCATGCCCTGAACAC 136777
Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAAT 37594
| ||||| || || ||||| | | ||||| | | || || ||||| ||||
Sbjct 136776 CAATACCGATCGGCCTATGGCGCATGTTAGAGCGCTTTGCCTCCGGTACGGGATAGTAAT 136717
Query 37595 TGATATCTATTATTTTATTTAGATT 37619
| || || || ||||| || |||||
Sbjct 136716 TTATGTCGATGATTTTGTTCAGATT 136692
>seq368
Length=285863
Score = 188 bits (208), Expect = 7e-43
Identities = 530/805 (66%), Gaps = 19/805 (2%)
Strand=Plus/Minus
Query 36823 TTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATA 36882
|| |||| || ||| ||||| || ||||| || |||| | |||| |||||||| || ||
Sbjct 115353 TTCGTTCGCAAATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATC 115294
Query 36883 CTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCT 36942
||||| || ||| | || | | | | ||| | | ||||| |||||
Sbjct 115293 GACGTCAGCTTGCTGTAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCG 115234
Query 36943 ATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGA---GATATCTCCCAA 36999
||||||||||| | ||||| ||||||| || ||| ||| | || ||||||||
Sbjct 115233 ATAAACGCACCCCGATCGGCAGCCATTT---TGATGCATGTTTTAACCGAAATCTCCCAC 115177
Query 37000 ACCGTTTTATATATTTGTTTTATATTATCTGGTA--AATCTAAATG--TTGAATAGAACC 37055
|||||||| || | | ||| | | |||| || | |||| ||||| || ||
Sbjct 115176 ACCGTTTTGTAGAGGTCCCGTATTTCCTGCGGTATCGAT-TCAATGCTCTGAATCGAGCC 115118
Query 37056 ATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTC 37115
||||| ||| |||| ||||| |||||| || ||||| | | | | | ||
Sbjct 115117 ATTATTGGACAAAATTTCGTTCTTCATGTCAAGATCCCACAGACCCATCGCTGTCAAATC 115058
Query 37116 TCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATAT 37175
| || ||||| | || || ||||| || || || || | ||| | | | || |
Sbjct 115057 TTGCAGCAGGTGATGGTTCACTACCTGGAACTCACCGGAAAGTACACGCCGATTGTAAAC 114998
Query 37176 ATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGT 37235
||| || || || |||| |||||| || |||| ||||| || | || || || ||
Sbjct 114997 GTTGGACGTGTACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGT 114938
Query 37236 AGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAG 37295
||||| ||||| | || || ||| | | || || | |||| ||| ||| ||
Sbjct 114937 CGGCATCGGTGCCAGCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTTTCTCTTTCAG 114878
Query 37296 TTCATTCCAATCCCATAAATCTGTTGGGTTCTTT-AACCACATATCATATTGTAGAATAC 37354
||| ||| | ||| | ||| | | |||||||| |||||| || || |||| || |
Sbjct 114877 TTCGGCCCAGTTCCAAAGATCCG-TCGGTTCTTTGTTCCACATGTCGTACTGTAAGATGC 114819
Query 37355 CTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGC 37414
|||| ||| | ||| | | | ||||| || || || |||| | || | || |
Sbjct 114818 CTTTGCTCACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTCAC 114759
Query 37415 AACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTG 37474
| || | ||| |||||| |||| || || ||||| || ||||| ||| | ||| |
Sbjct 114758 AGCTCGCTTCCAGTGCGCCATAGTAGATGGTTTCAAATATTTGCTGATTCAGCTTTTGGG 114699
Query 37475 CTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACAC 37534
||||||| || ||| ||| ||| | || ||| || || |||| |||| ||||||||||
Sbjct 114698 CTTCTTCACTTTCGTATGGATAACGCATTAAAATGAATGCATCTGCCATGCCCTGAACAC 114639
Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAAT 37594
||||||| || || ||||| | | ||| | || || | | | ||||| ||||
Sbjct 114638 CGATACCGATCGGCCTATGGCGCATGTTA-----AAGCGCTT-TGCCGCCGGATAGTAAT 114585
Query 37595 TGATATCTATTATTTTATTTAGATT 37619
| || || || ||||| || |||||
Sbjct 114584 TTATGTCGATGATTTTGTTCAGATT 114560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468228516629600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |