Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1559 123 2e-23 seq109 123 2e-23 >seq1559 Length=79761 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || ||||| || ||||||| | ||||| || | ||||||||| ||||| |||| Sbjct 22966 TCAGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACG 23025 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || | ||| | ||||| || | ||| |||| |||||||||||||| || || Sbjct 23026 GTACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAG 23085 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 | ||| ||||||| |||| ||| || || || || ||||| | | ||| | | Sbjct 23086 CAACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAG 23145 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT 21201 | ||||| |||| ||||| ||| || ||||||| Sbjct 23146 GATTCCAAGCGCTCATAATGATCCGACGATCGT 23178 >seq109 Length=460762 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || ||||| || ||||||| | ||||| || | ||||||||| ||||| |||| Sbjct 284476 TCAGTCCAGTGACATGCGCGATCATGTGGGTCAGCAGTGAGTAGCTGGCAATGTTGAACG 284417 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || | ||| | ||||| || | ||| |||| |||||||||||||| || || Sbjct 284416 GTACGCCCAAGCCAACATCGGCCGATCGCTGATACATTTGGCAGGACAGCTCTCCATCAG 284357 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 | ||| ||||||| |||| ||| || || || || ||||| | | ||| | | Sbjct 284356 CAACGAAAAACTGTGCCAAACAGTGGCACGGCGGCAGGGCCATGTTGGGAATGTCGGAAG 284297 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT 21201 | ||||| |||| ||||| ||| || ||||||| Sbjct 284296 GATTCCAAGCGCTCATAATGATCCGACGATCGT 284264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427512248023200