Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq561 104 2e-17 seq1541 96.9 3e-15 seq569 96.9 3e-15 seq843 89.7 5e-13 seq701 89.7 5e-13 seq368 86.0 6e-12 seq591 82.4 8e-11 >seq561 Length=219668 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || | || | || || || || ||||||||||| ||| Sbjct 140035 GCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGA 139976 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||||| | ||| || || ||| |||||||||| |||||||| || || Sbjct 139975 CAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGG 139916 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | || | | || | |||||||| || || | Sbjct 139915 GATTCCTTCCTTGTC-CTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGA 139857 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| ||| | ||||| ||||||| || || || || |||||||| Sbjct 139856 CCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCAT 139808 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || | || | || || || || ||||||||||| ||| Sbjct 140263 GCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGA 140204 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||||| | ||| || || ||| |||||||||| |||||||| || || Sbjct 140203 CAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGG 140144 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | || | | || | ||||||| || || | Sbjct 140143 GATTCCTTCCTTGTC-CTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGA 140085 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| ||| | ||||| ||||||| ||| || ||||| || ||||| Sbjct 140084 CCTCAAGGGTGATGGTCTTTCCGGTCAGCGTCTTGACGAAGATCTGCAT 140036 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || | || | || || || || ||||||||||| ||| | Sbjct 140718 CCACCACGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAC 140659 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| | ||| || || ||| |||| ||||| |||||||| || || Sbjct 140658 AGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGG 140599 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | || | | || | ||||||| || || || Sbjct 140598 ATTCCTTCCTTGTC-CTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGAC 140540 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | ||||| ||||||| || || ||||| || ||||| Sbjct 140539 CTCAAGGGTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCAT 140492 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || | || | || || || || ||||||||||| ||| Sbjct 140491 GCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGA 140432 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||||| | || || || ||| |||||||||| |||||||| || || Sbjct 140431 CAGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGG 140372 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | || | | || | ||||||| || || | Sbjct 140371 GATTCCTTCCTTGTC-CTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGA 140313 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | ||||| ||||||| || || ||||| || ||||| Sbjct 140312 CCTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 140264 >seq1541 Length=81579 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 52552 CCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACT 52611 ||||| ||| || |||| || ||||| | || |||||| | | | || |||| Sbjct 59497 CCGTGCGTGAAGAAGAAGGCCGACTGGGCCCTTAACTGGATCTCGAGCAAGAAGGCCAAC 59556 Query 52612 TTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTT 52671 |||| ||||||| |||||||||||||| || || ||| | || || || || ||| Sbjct 59557 TTTGGCGAACGTGTGGTCGCGTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCAGCTTT 59616 Query 52672 GCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGA 52730 ||| | || || | | || || | ||| | | |||||||| || ||||| ||||| Sbjct 59617 GCGTCCATTTTCTGGCTGAAGAAGCGTGGCC-TGATGCCCGGGCTGACGTTCTCGAACGA 59675 Query 52731 GTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTG 52772 | |||| ||||||||||| ||| |||| ||||| ||||| Sbjct 59676 GCTGATTTCGCGCGACGAGGGATTGCATTGCGATTTCGCGTG 59717 >seq569 Length=217393 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 52552 CCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACT 52611 ||||| ||| || |||| ||| ||||| | || |||||| | | | || |||| Sbjct 206177 CCGTGCGTGAAGAAGAAGGCTGACTGGGCCCTTAACTGGATCTCGAGCAAGAAGGCCAAC 206236 Query 52612 TTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTT 52671 |||| ||||||| ||||||||||||| || || ||| | || || ||||| ||| Sbjct 206237 TTTGGCGAACGTGTGGTCGCGTTTGCGGCCGTCGAGGGTATCTTCTTCAGCGGTAGCTTT 206296 Query 52672 GCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAG 52731 ||| | || || | | || | ||| | |||||||| || ||||| |||||| Sbjct 206297 GCGTCCATTTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGGCTGACGTTCTCGAACGAG 206356 Query 52732 TTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTG 52772 |||| ||||||||||| ||| |||| ||||| ||||| Sbjct 206357 CTGATTTCGCGCGACGAGGGATTGCATTGCGATTTCGCGTG 206397 >seq843 Length=160513 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || ||||| || || ||||| || ||| || |||| ||| || ||||| Sbjct 68860 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTG 68919 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||||| || |||||||||| ||||||||||| || ||||| || ||||| ||| || Sbjct 68920 CTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 68979 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | || || | || || ||||||| || | ||||| || || Sbjct 68980 CGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGT 69039 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 69040 GAGGGTTTTGACGAAGATCTGCAT 69063 >seq701 Length=187196 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || ||||| || || ||||| || ||| || |||| ||| || ||||| Sbjct 176827 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTG 176768 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||||| || |||||||||| ||||||||||| || ||||| || ||||| ||| || Sbjct 176767 CTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 176708 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | || || | || || ||||||| || | ||||| || || Sbjct 176707 CGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGT 176648 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 176647 GAGGGTTTTGACGAAGATCTGCAT 176624 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || ||||| || || ||||| || ||| || |||| ||| || ||||| Sbjct 183596 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTG 183537 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||||| || |||||||||| ||||||||||| || ||||| || ||||| ||| || Sbjct 183536 CTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 183477 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | || || | || || ||||||| || | ||||| || || Sbjct 183476 CGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGT 183417 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 183416 GAGGGTTTTGACGAAGATCTGCAT 183393 >seq368 Length=285863 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 152753 CGTACGAAAATAGTACATGCCCGTCTTGAGGCCACGTTGCCAGCCGTACATGTGCACCGA 152812 ||| || ||||||||||||||||| || || || || ||||||||| | ||| | ||| Sbjct 115351 CGTTCGCAAATAGTACATGCCCGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATCGA 115292 Query 152813 CGCCATCTTAGCCAAAG-TAGGGTCGGCCATGTACACGTTAAACGATTGACTTTGATCAA 152871 || || ||| || || | || ||||||| || | ||| |||||||| ||||| | Sbjct 115291 CGTCAGCTT-GCTGTAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCGA 115233 Query 152872 TAAATGCGCCTCTATCTGCTGCCATGTCGAT-CATG 152906 |||| || || | ||| || ||||| | ||| |||| Sbjct 115232 TAAACGCACCCCGATCGGCAGCCATTTTGATGCATG 115197 >seq591 Length=212830 Score = 82.4 bits (90), Expect = 8e-11 Identities = 114/156 (73%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 152753 CGTACGAAAATAGTACATGCCCGTCTTGAGGCCACGTTGCCAGCCGTACATGTGCACCGA 152812 ||| || |||||||||||||| || || || || || ||||||||| | ||| | ||| Sbjct 137489 CGTTCGCAAATAGTACATGCCTGTTTTCAGTCCCATTTTCCAGCCGTAAAAGTGGATCGA 137430 Query 152813 CGCCATCTTAGCCAAAG-TAGGGTCGGCCATGTACACGTTAAACGATTGACTTTGATCAA 152871 || || ||| || || | || ||||||| || | ||| |||||||| ||||| | Sbjct 137429 CGTCAGCTT-GCTGTAGTTCGGTTCGGCCACGTGTATGTTGAACGATTGCGACTGATCGA 137371 Query 152872 TAAATGCGCCTCTATCTGCTGCCATGTCGAT-CATG 152906 |||| || || | ||| || ||||| | ||| |||| Sbjct 137370 TAAACGCACCCCGATCGGCAGCCATTTTGATGCATG 137335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495750301528000