Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq843 91.5 1e-13 seq701 91.5 1e-13 seq569 86.0 6e-12 >seq843 Length=160513 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || || || || |||||||| ||| || |||| ||| || || || Sbjct 68861 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 68920 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 ||||| || |||||||||| ||||||||||| || ||||| || ||||| || || Sbjct 68921 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 68980 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||| |||| ||||| || |||| ||| | ||||| || || Sbjct 68981 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 69040 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | ||||| ||||| || ||||| Sbjct 69041 AGGGTTTTGACGAAGATCTGCAT 69063 >seq701 Length=187196 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || || || || |||||||| ||| || |||| ||| || || || Sbjct 176826 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 176767 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 ||||| || |||||||||| ||||||||||| || ||||| || ||||| || || Sbjct 176766 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 176707 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||| |||| ||||| || |||| ||| | ||||| || || Sbjct 176706 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 176647 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | ||||| ||||| || ||||| Sbjct 176646 AGGGTTTTGACGAAGATCTGCAT 176624 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || || || || |||||||| ||| || |||| ||| || || || Sbjct 183595 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 183536 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 ||||| || |||||||||| ||||||||||| || ||||| || ||||| || || Sbjct 183535 TTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 183476 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||| |||| ||||| || |||| ||| | ||||| || || Sbjct 183475 GCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTTACCCGTG 183416 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | ||||| ||||| || ||||| Sbjct 183415 AGGGTTTTGACGAAGATCTGCAT 183393 >seq569 Length=217393 Score = 86.0 bits (94), Expect = 6e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 50404 ACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGC 50463 |||||||| |||||| | || |||||||| || || ||| | || || ||||||| Sbjct 206235 ACTTTGGC-GAACGTGTGGTCGCGTTTGCGGCCGTCGAGGGTATCTTCTTCAGCGGTAGC 206293 Query 50464 TTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAAC 50523 ||||| |||| || | | || | |||| | |||||||| || ||||| ||| Sbjct 206294 TTTGCGTCCATTTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGGCTGACGTTCTCGAAC 206353 Query 50524 GAGTTGATTTCGCGCGACGAAGGAATGCA 50552 ||| |||||||||||||||| ||| |||| Sbjct 206354 GAGCTGATTTCGCGCGACGAGGGATTGCA 206382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506693776768800