Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq561 149 1e-30 seq1511 113 1e-19 seq654 113 1e-19 seq10564 84.2 5e-11 >seq561 Length=219668 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| |||||||| |||||||| || || || | ||| ||| Sbjct 140475 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 140416 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | ||| || || ||||| || || | ||| ||||| || || |||||||| || ||| Sbjct 140415 TCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 140356 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | ||| ||| ||||| ||||| || || || ||| Sbjct 140355 TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATGGTC 140296 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 140295 TTTCCGGTCAGAGTCTTGACGAAGATCTGCAT 140264 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| |||||||| |||||||| || || || | ||| ||| Sbjct 140019 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 139960 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | || || || ||||| || || | ||| ||||| || || |||||||| || ||| Sbjct 139959 TCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 139900 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | || ||| ||||| ||||| || || || ||| Sbjct 139899 TGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAGGGTGATGGTC 139840 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || || || || ||||| || ||||||||| Sbjct 139839 TTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTTG 139804 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || ||||| |||||||| |||||||| || || || | ||| ||||| Sbjct 140700 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCTTCC 140641 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | || || || ||||| || || | ||| ||||| || || |||||||| || |||||| Sbjct 140640 AACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGA 140581 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || || ||||| || | ||| ||| ||||| ||||| || || || ||||| Sbjct 140580 ATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTCTTT 140521 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || |||||||| Sbjct 140520 CCGGTCAGTGTCTTGACGAAGATCTGCAT 140492 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| |||||||| |||||||| || || || | ||| ||| Sbjct 140247 AGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCATCT 140188 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | || || || ||||| || || | ||| ||||| || || |||||||| || ||| Sbjct 140187 TCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTGTCC 140128 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | ||| ||| ||||| ||||| || || || ||| Sbjct 140127 TGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATGGTC 140068 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 140067 TTTCCGGTCAGCGTCTTGACGAAGATCTGCAT 140036 >seq1511 Length=84564 Score = 113 bits (124), Expect = 1e-19 Identities = 208/300 (69%), Gaps = 4/300 (1%) Strand=Plus/Minus Query 238558 AACAGCTCGAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGG 238617 || |||| || | ||| |||| ||||| || ||||| || || ||| | || |||| Sbjct 80390 AAGAGCTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGG 80331 Query 238618 TAAGACTAGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAAT 238677 | | || || |||||| | || || | ||||| ||||| ||||||||||| || | Sbjct 80330 TGAAGGAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGT 80271 Query 238678 GGACTAGATCTCCAAAGGAAGCTCTTAGATATAGTATTTATCTGAACGATAAATACGAAC 238737 |||| | | | ||| ||||||| ||| | || |||||||||||| ||| | Sbjct 80270 GGACCAAAACGCCAGAGGAAGCGCTTGCAACGGCCATCTATCTGAACGATCGGTACAGCC 80211 Query 238738 TCGACGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACAC 238796 | || || ||| ||||| ||||| ||||| ||||| |||||||| || || | ||| Sbjct 80210 TGGATGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCAGGCATTCAC 80152 Query 238797 GAT-AGGGCATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAGG 238855 ||| | ||| ||| ||| | || || || || || | |||||||| |||||||| Sbjct 80151 GATCAAGGC-TGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAAGG 80093 >seq654 Length=198528 Score = 113 bits (124), Expect = 1e-19 Identities = 226/330 (68%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 238558 AACAGCTCGAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGG 238617 || |||| || | ||| |||| ||||| || ||||| || || ||| | || |||| Sbjct 166789 AAGAGCTGGAAACGGCCAAAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGG 166848 Query 238618 TAAGACTAGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAAT 238677 | | || || |||||| | || || | ||||| ||||| ||||||||||| || | Sbjct 166849 TGAAGGAGGGTAAGATGCATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGT 166908 Query 238678 GGACTAGATCTCCAAAGGAAGCTCTTAGATATAGTATTTATCTGAACGATAAATACGAAC 238737 |||| | | | ||| ||||||| ||| | || |||||||||||| ||| | Sbjct 166909 GGACCAAAACGCCAGAGGAAGCGCTTGCAACGGCCATCTATCTGAACGATCGGTACAGCC 166968 Query 238738 TCGACGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACAC 238796 | || || ||| ||||| ||||| ||||| ||||| |||||||| || || | ||| Sbjct 166969 TGGATGG-ACGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCAC 167027 Query 238797 GAT-AGGGCATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAGG 238855 ||| | ||| ||| ||| | || || || || || | |||||||| ||||| || Sbjct 167028 GATCAAGGC-TGGAAGGAGCGTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAGGG 167086 Query 238856 AACTAAGAAAAAATTTGATGTAAATGCTTT 238885 | ||| ||||| | ||||| || || Sbjct 167087 ATGCAAGCGCAAATTCAACGTAAACGCGTT 167116 >seq10564 Length=2254 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||| || ||||||||||| || || ||||| || | ||| || ||||| ||| Sbjct 2253 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCCGATGGTTCGACC 2194 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || || ||||| || || || || || ||||| || ||||||||| Sbjct 2193 TCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCATTTTG 2143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150652081547720