Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1115 109 5e-19 seq1508 105 6e-18 >seq1115 Length=122843 Score = 109 bits (120), Expect = 5e-19 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||||| || | ||| || || || || || ||||||| ||||| || || | ||| Sbjct 111650 CTCGCAAATAAACTGGGCGATACGATCACCTTTCTTTACTTCGAAGTC--TGCCTCAGAA 111593 Query 5644 G--TTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCC 5701 ||||||||||| ||||| || |||||||||||||| | || | ||||| || || Sbjct 111592 TGATTGAACAGCACGACGCCAACATTGCCGCGGTAGTCCTCATCGACGACGCCGGCTCCT 111533 Query 5702 ACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCA 5761 || |||||||| | || || |||| ||||| || ||||| || || ||||| || || Sbjct 111532 ACATCGATGAAATTTTTCACAGCCAAACCGGACCGTGGAGCTACTCGTCCGTAACAACCT 111473 Query 5762 TCGGGAAGCTGTATCTGCAGGTCCGT 5787 ||||| | || | ||| | ||| || Sbjct 111472 TCGGGCACATGCACCTGGATGTCGGT 111447 >seq1508 Length=84706 Score = 105 bits (116), Expect = 6e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||||| || | ||| || || || || || ||||||| ||||| || || | ||| Sbjct 38555 CTCGCAAATAAACTGGGCGATACGATCACCTTTCTTTACTTCGAAGTC--TGCCTCAGAA 38498 Query 5644 G--TTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCC 5701 ||||||||||| ||||| || |||||||||||||| | || | ||||| || || Sbjct 38497 TGATTGAACAGCACGACGCCAACATTGCCGCGGTAGTCCTCATCGACGACGCCGGCTCCT 38438 Query 5702 ACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCA 5761 || |||||||| | || || |||| ||||| || ||||| || || ||||| || || Sbjct 38437 ACATCGATGAAATTTTTCACAGCCAAACCGGACCGTGGAGCTACTCGTCCGTAACAACCT 38378 Query 5762 TCGGGAAGCTGTATCTGCAGGTCCGT 5787 || || | || | ||| | ||| || Sbjct 38377 TCCGGCACATGCACCTGGATGTCGGT 38352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429789243240080