Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq919 86.0 3e-12
seq499 86.0 3e-12
seq313 86.0 3e-12
seq54 84.2 1e-11
>seq919
Length=149610
Score = 86.0 bits (94), Expect = 3e-12
Identities = 80/101 (79%), Gaps = 5/101 (5%)
Strand=Plus/Minus
Query 11433 ATAGAATTAATAAAA---AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489
||| ||| || |||| |||| | |||| | || |||||||||| ||||||||||
Sbjct 97671 ATAAAATAAAAAAAAGAGAATCGA--TGGCTCCAGAGAGGATCGAACTCACGACCTTCGC 97614
Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||||||||||||||||||| |||| |||||||| | ||||
Sbjct 97613 GTTATTAGCACGACGCTCTAACCAGCTGAGCTATGGAGCCG 97573
>seq499
Length=240068
Score = 86.0 bits (94), Expect = 3e-12
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
|||||||| | || |||||||||| ||||||||||||||||||||| ||||||| ||
Sbjct 9975 AAATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACTACGCTCTAAC 9916
Query 11512 CAACTGAGCTAATGGGCCG 11530
|| |||||||| | ||||
Sbjct 9915 CAGCTGAGCTATGGAGCCG 9897
Score = 82.4 bits (90), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 2/76 (3%)
Strand=Plus/Minus
Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA--CGACGCT 11506
||||| ||||| | || |||||||||| |||||||||||||||||||| |||||||
Sbjct 13088 ATCAATTTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGCGACGCT 13029
Query 11507 CTRACCAACTGAGCTA 11522
|| |||| ||||||||
Sbjct 13028 CTAACCAGCTGAGCTA 13013
>seq313
Length=310999
Score = 86.0 bits (94), Expect = 3e-12
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
|||||||| | || |||||||||| ||||||||||||||||||||||||| ||| ||
Sbjct 5465 AAATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGGTCTAAC 5406
Query 11512 CAACTGAGCTA 11522
|| ||||||||
Sbjct 5405 CAGCTGAGCTA 5395
Score = 86.0 bits (94), Expect = 3e-12
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
|||||||| | || |||||||||| ||||||||||||||||||||| ||||||| ||
Sbjct 6271 AAATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACCACGCTCTAAC 6212
Query 11512 CAACTGAGCTA 11522
|| ||||||||
Sbjct 6211 CAGCTGAGCTA 6201
Score = 84.2 bits (92), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 11440 TAATAAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||| ||| | | || |||||| | || |||||||||| |||||||||||||||||||
Sbjct 47960 TAAAAAAGATTTAATATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGC 48019
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||||| |||| |||| |||||||| | ||||
Sbjct 48020 ACGACCCTCTAACCAGCTGAGCTATGGAGCCG 48051
>seq54
Length=595160
Score = 84.2 bits (92), Expect = 1e-11
Identities = 70/84 (83%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 11441 AATAAAAAAT-CAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
|| ||||||| ||| | |||| | || |||||||||| |||||||||||||||||||
Sbjct 115111 AACAAAAAATGCAAGTGTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGC 115052
Query 11499 ACGACGCTCTRACCAACTGAGCTA 11522
|||||| ||| |||| ||||||||
Sbjct 115051 ACGACGGTCTAACCAGCTGAGCTA 115028
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261329973514840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |