Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq919 86.0 3e-12 seq499 86.0 3e-12 seq313 86.0 3e-12 seq54 84.2 1e-11 >seq919 Length=149610 Score = 86.0 bits (94), Expect = 3e-12 Identities = 80/101 (79%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 11433 ATAGAATTAATAAAA---AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489 ||| ||| || |||| |||| | |||| | || |||||||||| |||||||||| Sbjct 97671 ATAAAATAAAAAAAAGAGAATCGA--TGGCTCCAGAGAGGATCGAACTCACGACCTTCGC 97614 Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||| |||| |||||||| | |||| Sbjct 97613 GTTATTAGCACGACGCTCTAACCAGCTGAGCTATGGAGCCG 97573 >seq499 Length=240068 Score = 86.0 bits (94), Expect = 3e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||| | || |||||||||| ||||||||||||||||||||| ||||||| || Sbjct 9975 AAATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACTACGCTCTAAC 9916 Query 11512 CAACTGAGCTAATGGGCCG 11530 || |||||||| | |||| Sbjct 9915 CAGCTGAGCTATGGAGCCG 9897 Score = 82.4 bits (90), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA--CGACGCT 11506 ||||| ||||| | || |||||||||| |||||||||||||||||||| ||||||| Sbjct 13088 ATCAATTTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGCGACGCT 13029 Query 11507 CTRACCAACTGAGCTA 11522 || |||| |||||||| Sbjct 13028 CTAACCAGCTGAGCTA 13013 >seq313 Length=310999 Score = 86.0 bits (94), Expect = 3e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||| | || |||||||||| ||||||||||||||||||||||||| ||| || Sbjct 5465 AAATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGGTCTAAC 5406 Query 11512 CAACTGAGCTA 11522 || |||||||| Sbjct 5405 CAGCTGAGCTA 5395 Score = 86.0 bits (94), Expect = 3e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 |||||||| | || |||||||||| ||||||||||||||||||||| ||||||| || Sbjct 6271 AAATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACCACGCTCTAAC 6212 Query 11512 CAACTGAGCTA 11522 || |||||||| Sbjct 6211 CAGCTGAGCTA 6201 Score = 84.2 bits (92), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| ||| | | || |||||| | || |||||||||| ||||||||||||||||||| Sbjct 47960 TAAAAAAGATTTAATATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGC 48019 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| |||| |||| |||||||| | |||| Sbjct 48020 ACGACCCTCTAACCAGCTGAGCTATGGAGCCG 48051 >seq54 Length=595160 Score = 84.2 bits (92), Expect = 1e-11 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 11441 AATAAAAAAT-CAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 || ||||||| ||| | |||| | || |||||||||| ||||||||||||||||||| Sbjct 115111 AACAAAAAATGCAAGTGTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGC 115052 Query 11499 ACGACGCTCTRACCAACTGAGCTA 11522 |||||| ||| |||| |||||||| Sbjct 115051 ACGACGGTCTAACCAGCTGAGCTA 115028 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261329973514840