Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq98 140 3e-28
seq561 122 8e-23
seq2250 109 5e-19
seq843 82.4 7e-11
seq701 82.4 7e-11
>seq98
Length=483913
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | || || | ||||||||||| || || ||||| || | ||| || ||| |
Sbjct 464944 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 464885
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| |||||| ||||| |||||| | ||||| || | |||||||||||||||
Sbjct 464884 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 464825
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || ||||| | || || ||||| ||| ||| ||||| | | |||||
Sbjct 464824 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACC 464765
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||||||| || ||||| || || ||||| |||||||||||
Sbjct 464764 TCCAACGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 464718
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | || || | ||||||||||| || || ||||| || | ||| || ||| |
Sbjct 464716 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 464657
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| |||||| ||||| |||||| | ||||| || | |||||||||||||||
Sbjct 464656 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 464597
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || ||||| | || || ||||| ||| ||| ||||| | | |||||
Sbjct 464596 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAAGGCTCGACC 464537
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010
|| | ||||||||| || ||||| | || ||||||||||| ||||| ||
Sbjct 464536 TCCAACGTGATGGTCTTGCCAGTCAACGTCTTCACAAAGATTTGCATCCT 464487
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || || ||||| || | ||| || ||| || ||| ||||||
Sbjct 465154 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 465095
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| |||||| | ||||| || | |||||||||||||||||||| || ||||| |
Sbjct 465094 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 465035
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||| ||| ||| ||||| | | | ||||| || | ||||||||| ||
Sbjct 465034 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTG 464975
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || ||||| |||||||||||
Sbjct 464974 CCAGTCAGCGTCTTCACGAAGATCTGCAT 464946
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || || ||||| || | ||| || ||| || ||| ||||||
Sbjct 465616 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCCTCA 465557
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| |||||| | ||||| || | |||||||||||||||||||| || ||||| |
Sbjct 465556 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 465497
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||| ||| ||| ||||| | | | ||||| || | ||||||||| ||
Sbjct 465496 ATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACCTCCAGCGTGATGGTCTTG 465437
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || ||||| |||||||||||
Sbjct 465436 CCAGTCAGCGTCTTCACGAAGATCTGCAT 465408
>seq561
Length=219668
Score = 122 bits (134), Expect = 8e-23
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
|||| | ||| || | || ||||| |||| || | || |||||||| || | |||||
Sbjct 140726 TTTAAATTCCACCACGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTAT 140667
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| || ||| ||| |||| ||| || ||| ||||||| | | |||||||
Sbjct 140666 AGTCGGACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGAT 140607
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || || ||||| ||||| | ||| || ||||| || ||| ||||| |
Sbjct 140606 CTGGGGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATG 140547
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| |||| |||||||| ||||| || || || || || |||||||||||||
Sbjct 140546 GTTCGACCTCAAGGGTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCATGC 140490
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||| || | || |||||||| || | |||||| ||| || ||| |
Sbjct 140022 CGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCA 139963
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| ||| || ||| ||||||| | | |||||||| || || || ||||| |||
Sbjct 139962 TCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTG 139903
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || ||||| || ||| ||||| | | ||||| |||| ||||||
Sbjct 139902 TCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCGACCTCAAGGGTGATG 139843
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || ||||| ||||||||||| |||||
Sbjct 139842 GTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCAT 139808
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||| || | || |||||||| || | |||||| ||| || ||| |
Sbjct 140250 CGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCA 140191
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| ||| || ||| ||||||| | | |||||||| || || || ||||| |||
Sbjct 140190 TCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTG 140131
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || ||||| || ||| ||||| | | ||||| |||| ||||||
Sbjct 140130 TCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCAAGGGTGATG 140071
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| ||||| || || || || || |||||||||||||
Sbjct 140070 GTCTTTCCGGTCAGCGTCTTGACGAAGATCTGCATGC 140034
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||| || | || |||||||| || | |||||| ||| || ||| |
Sbjct 140478 CGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGACAGGGTGCGACCA 140419
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| || || ||| ||||||| | | |||||||| || || || ||||| |||
Sbjct 140418 TCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCTTCCTTG 140359
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || ||||| || ||| ||||| | | ||||| || | ||||||
Sbjct 140358 TCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCGACCTCCAGGGTGATG 140299
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| ||||| || ||||| || || |||||||||||||
Sbjct 140298 GTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCATGC 140262
>seq2250
Length=42400
Score = 109 bits (120), Expect = 5e-19
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
||||| ||||| || | || |||||||| || | ||| || ||| || |||
Sbjct 17053 TCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACC 16994
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||||||| || ||| ||||||| | | ||||||||||||||||| ||||| ||
Sbjct 16993 ATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCCTT 16934
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | || || || || || ||| ||||| | | ||||| || | |||||
Sbjct 16933 ATCCTGGATCTTGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGACCTCGAGTGTGAT 16874
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011
||| || || || || |||||||| || ||||||||| ||
Sbjct 16873 GGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCATGATT 16834
>seq843
Length=160513
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||| ||| | || || ||||| || | ||| || ||| || ||| |||||
Sbjct 68854 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 68913
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || ||| | ||||| | | |||||||| || || || || || ||||| |
Sbjct 68914 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 68973
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||| || ||| || || | | ||||| |||| || ||||| ||
Sbjct 68974 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 69033
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || |||||||||||
Sbjct 69034 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 69063
>seq701
Length=187196
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||| ||| | || || ||||| || | ||| || ||| || ||| |||||
Sbjct 176833 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 176774
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || ||| | ||||| | | |||||||| || || || || || ||||| |
Sbjct 176773 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 176714
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||| || ||| || || | | ||||| |||| || ||||| ||
Sbjct 176713 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 176654
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || |||||||||||
Sbjct 176653 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 176624
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||| ||| | || || ||||| || | ||| || ||| || ||| |||||
Sbjct 183602 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTC 183543
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || ||| | ||||| | | |||||||| || || || || || ||||| |
Sbjct 183542 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCGGGCGGGATGCCCTCCTTGTCCTG 183483
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||| || ||| || || | | ||||| |||| || ||||| ||
Sbjct 183482 GATCTTCGCCTTCACATTCTCGATCGTATCCGATGGTTCGACCTCAAGAGTAATGGTCTT 183423
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || |||||||||||
Sbjct 183422 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 183393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448007711852400
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