Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq351 201 2e-47 seq954 197 2e-46 seq10968 183 5e-42 seq10716 183 5e-42 seq9597 183 5e-42 seq5428 183 5e-42 seq5381 183 5e-42 seq492 176 7e-40 seq263 176 7e-40 >seq351 Length=294813 Score = 201 bits (222), Expect = 2e-47 Identities = 207/268 (77%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||| || | | | || ||||||||||| || ||||||||||||||||| Sbjct 271534 GCCAAGCGTCATCGTAAGGTGT-TGCGCGATAACATCCAGGGCATCACCAAGCCAGCTAT 271592 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||||||||||||||||||| || |||||| |||| || | |||| || |||| Sbjct 271593 CCGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGGCTCATCTACGAGGAGAC 271652 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || ||||| | |||||| ||| ||| || | |||||| | || || || Sbjct 271653 GCGTGGCGTGCTGAAGGTGTTCCTCGAGAACGTAATTCGCGATGCTGTGACGTACACGGA 271712 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || |||||||| || ||| |||||||| ||||||| ||| |||| || || || Sbjct 271713 ACACGCCAAGCGTAAGACCGTAACCGCCATGGATGTCGTCTACGCACTGAAGCGCCAGGG 271772 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| ||| ||||| Sbjct 271773 CCGCACTCTGTACGGTTTCGGAGGTTAA 271800 Score = 192 bits (212), Expect = 9e-45 Identities = 205/268 (76%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||| || | | | || ||||||||||| || ||||||||||| || || Sbjct 277828 GCCAAGCGTCATCGTAAGGTGT-TGCGCGATAACATCCAGGGCATCACCAAGCCGGCCAT 277886 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||||||||||||||||||| || |||||| |||| || | |||| || |||| Sbjct 277887 CCGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGGCTCATCTACGAGGAGAC 277946 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || ||||| | |||||| ||| ||| || | |||||| | || || || Sbjct 277947 GCGTGGCGTGCTGAAGGTGTTCCTCGAGAACGTAATTCGCGATGCTGTGACGTACACGGA 278006 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || |||||||| |||||| |||||||| ||||||| ||| |||| || || || Sbjct 278007 ACACGCCAAGCGTAAGACCGTCACCGCCATGGATGTCGTCTACGCACTGAAGCGCCAGGG 278066 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| ||| | ||| Sbjct 278067 CCGCACTCTGTACGGTTTCGGAGGATAA 278094 >seq954 Length=144445 Score = 197 bits (218), Expect = 2e-46 Identities = 204/267 (76%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | || || ||||||||||| || ||||||||||| || ||| Sbjct 141795 GCCAAGCGTCATCGTAAGGTGCTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 141854 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||||||||||||||| || |||||| |||| || | |||| || |||| Sbjct 141855 CGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGGCTCATCTACGAGGAGACG 141914 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || ||||| | |||||| ||| ||| || | |||||| | || || || Sbjct 141915 CGTGGCGTGCTGAAGGTGTTCCTCGAGAACGTAATTCGCGATGCTGTGACGTACACGGAA 141974 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || |||||||| |||||| |||||||| ||||||| ||| |||| || || ||| Sbjct 141975 CACGCCAAGCGTAAGACCGTCACCGCCATGGATGTCGTCTACGCACTGAAGCGCCAGGGC 142034 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| ||| ||||| Sbjct 142035 CGCACTCTGTACGGTTTCGGAGGTTAA 142061 >seq10968 Length=1408 Score = 183 bits (202), Expect = 5e-42 Identities = 205/273 (75%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | | || ||||||||||| || ||||||||||| || ||| Sbjct 424 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 483 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || | Sbjct 484 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 543 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||| | ||||| ||| || |||| |||||| || ||| ||||| Sbjct 544 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 603 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | ||||| |||| || || |||| |||||||| Sbjct 604 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 663 Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704 || | | || ||||| ||| | | ||||||| Sbjct 664 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 696 >seq10716 Length=1857 Score = 183 bits (202), Expect = 5e-42 Identities = 205/273 (75%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | | || ||||||||||| || ||||||||||| || ||| Sbjct 318 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 377 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || | Sbjct 378 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 437 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||| | ||||| ||| || |||| |||||| || ||| ||||| Sbjct 438 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 497 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | ||||| |||| || || |||| |||||||| Sbjct 498 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 557 Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704 || | | || ||||| ||| | | ||||||| Sbjct 558 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 590 >seq9597 Length=2546 Score = 183 bits (202), Expect = 5e-42 Identities = 205/273 (75%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | | || ||||||||||| || ||||||||||| || ||| Sbjct 981 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 1040 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || | Sbjct 1041 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 1100 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||| | ||||| ||| || |||| |||||| || ||| ||||| Sbjct 1101 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 1160 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | ||||| |||| || || |||| |||||||| Sbjct 1161 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 1220 Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704 || | | || ||||| ||| | | ||||||| Sbjct 1221 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 1253 >seq5428 Length=5017 Score = 183 bits (202), Expect = 5e-42 Identities = 205/273 (75%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | | || ||||||||||| || ||||||||||| || ||| Sbjct 1266 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 1207 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || | Sbjct 1206 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 1147 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||| | ||||| ||| || |||| |||||| || ||| ||||| Sbjct 1146 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 1087 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | ||||| |||| || || |||| |||||||| Sbjct 1086 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 1027 Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704 || | | || ||||| ||| | | ||||||| Sbjct 1026 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 994 >seq5381 Length=5038 Score = 183 bits (202), Expect = 5e-42 Identities = 205/273 (75%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | | || ||||||||||| || ||||||||||| || ||| Sbjct 1086 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 1027 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || | Sbjct 1026 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 967 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||| | ||||| ||| || |||| |||||| || ||| ||||| Sbjct 966 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 907 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | ||||| |||| || || |||| |||||||| Sbjct 906 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 847 Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704 || | | || ||||| ||| | | ||||||| Sbjct 846 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 814 >seq492 Length=241190 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | |||||| ||||||||||| || || || ||||| || ||| Sbjct 182220 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 182161 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||| ||||||||||| |||||| | || ||| || |||| || || | Sbjct 182160 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 182101 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| ||||| | ||||| ||| ||| |||| || || || ||| |||||| Sbjct 182100 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 182041 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| || || | |||||| | || || || |||| || || ||| Sbjct 182040 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 181981 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| ||| ||||| Sbjct 181980 CGTACTCTGTACGGTTTCGGAGGTTAA 181954 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | |||||| ||||||||||| || || || ||||| || ||| Sbjct 183238 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 183179 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||| ||||||||||| |||||| | || ||| || |||| || || | Sbjct 183178 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 183119 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| ||||| | ||||| ||| ||| |||| || || || ||| |||||| Sbjct 183118 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 183059 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| || || | |||||| | || || || |||| || || ||| Sbjct 183058 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 182999 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| ||| ||||| Sbjct 182998 CGTACTCTGTACGGTTTCGGAGGTTAA 182972 >seq263 Length=343485 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | |||||| ||||||||||| || || || ||||| || ||| Sbjct 233745 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 233686 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||| ||||||||||| |||||| | || ||| || |||| || || | Sbjct 233685 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 233626 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| ||||| | ||||| ||| ||| |||| || || || ||| |||||| Sbjct 233625 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 233566 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| || || | |||||| | || || || |||| || || ||| Sbjct 233565 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 233506 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| ||| ||||| Sbjct 233505 CGTACTCTGTACGGTTTCGGAGGTTAA 233479 Score = 176 bits (194), Expect = 7e-40 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | |||||| ||||||||||| || || || ||||| || ||| Sbjct 236781 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 236722 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||| ||||||||||| |||||| | || ||| || |||| || || | Sbjct 236721 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 236662 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| ||||| | ||||| ||| ||| |||| || || || ||| |||||| Sbjct 236661 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 236602 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| || || | |||||| | || || || |||| || || ||| Sbjct 236601 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 236542 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| ||| ||||| Sbjct 236541 CGTACTCTGTACGGTTTCGGAGGTTAA 236515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79028945208870