Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq351 201 2e-47
seq954 197 2e-46
seq10968 183 5e-42
seq10716 183 5e-42
seq9597 183 5e-42
seq5428 183 5e-42
seq5381 183 5e-42
seq492 176 7e-40
seq263 176 7e-40
>seq351
Length=294813
Score = 201 bits (222), Expect = 2e-47
Identities = 207/268 (77%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||| || | | | || ||||||||||| || |||||||||||||||||
Sbjct 271534 GCCAAGCGTCATCGTAAGGTGT-TGCGCGATAACATCCAGGGCATCACCAAGCCAGCTAT 271592
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||||||||||||||||||| || |||||| |||| || | |||| || ||||
Sbjct 271593 CCGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGGCTCATCTACGAGGAGAC 271652
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || ||||| | |||||| ||| ||| || | |||||| | || || ||
Sbjct 271653 GCGTGGCGTGCTGAAGGTGTTCCTCGAGAACGTAATTCGCGATGCTGTGACGTACACGGA 271712
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || |||||||| || ||| |||||||| ||||||| ||| |||| || || ||
Sbjct 271713 ACACGCCAAGCGTAAGACCGTAACCGCCATGGATGTCGTCTACGCACTGAAGCGCCAGGG 271772
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || ||||| ||| |||||
Sbjct 271773 CCGCACTCTGTACGGTTTCGGAGGTTAA 271800
Score = 192 bits (212), Expect = 9e-45
Identities = 205/268 (76%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||| || | | | || ||||||||||| || ||||||||||| || ||
Sbjct 277828 GCCAAGCGTCATCGTAAGGTGT-TGCGCGATAACATCCAGGGCATCACCAAGCCGGCCAT 277886
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||||||||||||||||||| || |||||| |||| || | |||| || ||||
Sbjct 277887 CCGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGGCTCATCTACGAGGAGAC 277946
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || ||||| | |||||| ||| ||| || | |||||| | || || ||
Sbjct 277947 GCGTGGCGTGCTGAAGGTGTTCCTCGAGAACGTAATTCGCGATGCTGTGACGTACACGGA 278006
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || |||||||| |||||| |||||||| ||||||| ||| |||| || || ||
Sbjct 278007 ACACGCCAAGCGTAAGACCGTCACCGCCATGGATGTCGTCTACGCACTGAAGCGCCAGGG 278066
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || ||||| ||| | |||
Sbjct 278067 CCGCACTCTGTACGGTTTCGGAGGATAA 278094
>seq954
Length=144445
Score = 197 bits (218), Expect = 2e-46
Identities = 204/267 (76%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | || || ||||||||||| || ||||||||||| || |||
Sbjct 141795 GCCAAGCGTCATCGTAAGGTGCTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 141854
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||||||||||||||| || |||||| |||| || | |||| || ||||
Sbjct 141855 CGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGTATCTCCGGGCTCATCTACGAGGAGACG 141914
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || ||||| | |||||| ||| ||| || | |||||| | || || ||
Sbjct 141915 CGTGGCGTGCTGAAGGTGTTCCTCGAGAACGTAATTCGCGATGCTGTGACGTACACGGAA 141974
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || |||||||| |||||| |||||||| ||||||| ||| |||| || || |||
Sbjct 141975 CACGCCAAGCGTAAGACCGTCACCGCCATGGATGTCGTCTACGCACTGAAGCGCCAGGGC 142034
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || ||||| ||| |||||
Sbjct 142035 CGCACTCTGTACGGTTTCGGAGGTTAA 142061
>seq10968
Length=1408
Score = 183 bits (202), Expect = 5e-42
Identities = 205/273 (75%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||||| | | || ||||||||||| || ||||||||||| || |||
Sbjct 424 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 483
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || |
Sbjct 484 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 543
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||| | ||||| ||| || |||| |||||| || ||| |||||
Sbjct 544 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 603
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| ||||| | ||||| |||| || || |||| ||||||||
Sbjct 604 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 663
Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704
|| | | || ||||| ||| | | |||||||
Sbjct 664 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 696
>seq10716
Length=1857
Score = 183 bits (202), Expect = 5e-42
Identities = 205/273 (75%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||||| | | || ||||||||||| || ||||||||||| || |||
Sbjct 318 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 377
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || |
Sbjct 378 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 437
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||| | ||||| ||| || |||| |||||| || ||| |||||
Sbjct 438 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 497
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| ||||| | ||||| |||| || || |||| ||||||||
Sbjct 498 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 557
Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704
|| | | || ||||| ||| | | |||||||
Sbjct 558 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 590
>seq9597
Length=2546
Score = 183 bits (202), Expect = 5e-42
Identities = 205/273 (75%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||||| | | || ||||||||||| || ||||||||||| || |||
Sbjct 981 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 1040
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || |
Sbjct 1041 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 1100
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||| | ||||| ||| || |||| |||||| || ||| |||||
Sbjct 1101 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 1160
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| ||||| | ||||| |||| || || |||| ||||||||
Sbjct 1161 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 1220
Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704
|| | | || ||||| ||| | | |||||||
Sbjct 1221 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 1253
>seq5428
Length=5017
Score = 183 bits (202), Expect = 5e-42
Identities = 205/273 (75%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||||| | | || ||||||||||| || ||||||||||| || |||
Sbjct 1266 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 1207
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || |
Sbjct 1206 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 1147
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||| | ||||| ||| || |||| |||||| || ||| |||||
Sbjct 1146 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 1087
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| ||||| | ||||| |||| || || |||| ||||||||
Sbjct 1086 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 1027
Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704
|| | | || ||||| ||| | | |||||||
Sbjct 1026 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 994
>seq5381
Length=5038
Score = 183 bits (202), Expect = 5e-42
Identities = 205/273 (75%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||||| | | || ||||||||||| || ||||||||||| || |||
Sbjct 1086 GCCAAGCGTCATCGCAAAGTGTTGCGCGATAACATCCAGGGCATCACCAAGCCGGCCATC 1027
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||||||||| |||||||| ||||| |||||| ||||||| || |||| || || |
Sbjct 1026 CGTCGTCTGGCCCGTCGTGGAGGAGTGAAGCGTATCTCTGGCCTGATCTACGAGGAAACC 967
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||| | ||||| ||| || |||| |||||| || ||| |||||
Sbjct 966 CGTGGCGTGCTGAAAGTGTTCCTGGAGAATGTGATCCGTGATGCGGTCACCTACACCGAA 907
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| ||||| | ||||| |||| || || |||| ||||||||
Sbjct 906 CACGCCAAGCGCAAGACCGTCACAGCGATGGACGTCGTGTACGCGCTGAAGCGTCAAGGT 847
Query 16673 CGTAAGATTTATGGTTTTGGAAG-TTAATCTTC 16704
|| | | || ||||| ||| | | |||||||
Sbjct 846 CGCACCCTGTACGGTTTCGGAGGCTAAATCTTC 814
>seq492
Length=241190
Score = 176 bits (194), Expect = 7e-40
Identities = 199/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | |||||| ||||||||||| || || || ||||| || |||
Sbjct 182220 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 182161
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| ||||||||||| |||||| | || ||| || |||| || || |
Sbjct 182160 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 182101
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 182100 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 182041
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| || || | |||||| | || || || |||| || || |||
Sbjct 182040 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 181981
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | || ||||| ||| |||||
Sbjct 181980 CGTACTCTGTACGGTTTCGGAGGTTAA 181954
Score = 176 bits (194), Expect = 7e-40
Identities = 199/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | |||||| ||||||||||| || || || ||||| || |||
Sbjct 183238 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 183179
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| ||||||||||| |||||| | || ||| || |||| || || |
Sbjct 183178 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 183119
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 183118 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 183059
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| || || | |||||| | || || || |||| || || |||
Sbjct 183058 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 182999
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | || ||||| ||| |||||
Sbjct 182998 CGTACTCTGTACGGTTTCGGAGGTTAA 182972
>seq263
Length=343485
Score = 176 bits (194), Expect = 7e-40
Identities = 199/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | |||||| ||||||||||| || || || ||||| || |||
Sbjct 233745 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 233686
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| ||||||||||| |||||| | || ||| || |||| || || |
Sbjct 233685 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 233626
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 233625 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 233566
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| || || | |||||| | || || || |||| || || |||
Sbjct 233565 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 233506
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | || ||||| ||| |||||
Sbjct 233505 CGTACTCTGTACGGTTTCGGAGGTTAA 233479
Score = 176 bits (194), Expect = 7e-40
Identities = 199/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| || | |||||| ||||||||||| || || || ||||| || |||
Sbjct 236781 GCCAAGCGTCACCGAAAGGTTCTTCGCGATAACATCCAGGGTATTACGAAGCCCGCCATC 236722
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||||||||| ||||||||||| |||||| | || ||| || |||| || || |
Sbjct 236721 CGTCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCCGGACTGATCTACGAGGAAACG 236662
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | ||||| ||| ||| |||| || || || ||| ||||||
Sbjct 236661 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 236602
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| || || | |||||| | || || || |||| || || |||
Sbjct 236601 CACGCCAAGCGCAAGACCGTGACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 236542
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | || ||||| ||| |||||
Sbjct 236541 CGTACTCTGTACGGTTTCGGAGGTTAA 236515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79028945208870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |