Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq654 147 2e-30 seq1511 143 3e-29 seq561 116 4e-21 seq368 100 3e-16 seq591 95.1 1e-14 >seq654 Length=198528 Score = 147 bits (162), Expect = 2e-30 Identities = 215/304 (71%), Gaps = 0/304 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 ||||||| || || || ||||| | || |||| ||| | || |||||||| || | Sbjct 166807 AAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAGGAGGGTAAGATGC 166866 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | || | | | |||||||||||||||||||| || |||||||| |||| || ||| Sbjct 166867 ATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACCAAAACGCCAGAGG 166926 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||| | | || ||||| |||||| | ||||| || || || |||||||| | Sbjct 166927 AAGCGCTTGCAACGGCCATCTATCTGAACGATCGGTACAGCCTGGATGGACGCGATCCGA 166986 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAAC 71909 |||| || ||||||||||||||| || ||| |||||||| | ||| || | Sbjct 166987 ACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATCAAGGCTGGAAGGAGC 167046 Query 71910 GTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATG 71969 || || | || || || ||||| || ||||| | | || ||| | ||||| ||||| | Sbjct 167047 GTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAGGGATGCAAGCGCAAATTCAACG 167106 Query 71970 TGAA 71973 | || Sbjct 167107 TAAA 167110 >seq1511 Length=84564 Score = 143 bits (158), Expect = 3e-29 Identities = 214/304 (70%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 ||||||| || || || ||||| | || |||| ||| | || |||||||| || | Sbjct 80372 AAACGCACGACGATCTGTGGAACTCGGCACAGCTGCAGATGGTGAAGGAGGGTAAGATGC 80313 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | || | | | |||||||||||||||||||| || |||||||| |||| || ||| Sbjct 80312 ATGGGTTTTTGAGGATGTACTGGGCCAAAAAGATACTGGAGTGGACCAAAACGCCAGAGG 80253 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||| | | || ||||| |||||| | ||||| || || || |||||||| | Sbjct 80252 AAGCGCTTGCAACGGCCATCTATCTGAACGATCGGTACAGCCTGGATGGACGCGATCCGA 80193 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAAC 71909 |||| || ||||||||||||||| || || |||||||| | ||| || | Sbjct 80192 ACGGGTACGTCGGTTGCATGTGGTCGATCGCAGGCATTCACGATCAAGGCTGGAAGGAGC 80133 Query 71910 GTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATG 71969 || || | || || || ||||| || ||||| | | || ||| | ||||| ||||| | Sbjct 80132 GTGAAATTTTCGGGAAGATTCGGTACATGAACTATGAAGGGTGCAAGCGCAAATTCAACG 80073 Query 71970 TGAA 71973 | || Sbjct 80072 TAAA 80069 >seq561 Length=219668 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 |||||||||| | ||||| || || | || ||||| | |||||| | || | ||| | Sbjct 139804 CAAAATGCAAATCTTTGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACC 139863 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||| |||||| | || || |||||| ||||| ||||| || || || || Sbjct 139864 ATCCGACACAATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGA 139923 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || | || || | | |||||| || | ||||||| | | | | | |||||| Sbjct 139924 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTA 139983 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||||||||| || ||||| || |||||||||||||| Sbjct 139984 TAACATTCAGAAGGAATCCACCCTCCATCTGGTCCTG 140020 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||| | || ||||| | |||||| | || | ||| || | Sbjct 140492 ATGCAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140551 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || |||||| ||||| ||||| || || || ||||| Sbjct 140552 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCAGATCAG 140611 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | | |||||| || | ||||||| | | | | | |||||||||| Sbjct 140612 CAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140671 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| || ||||| || ||||||||||| || | || | || |||| Sbjct 140672 ATTCAGAAGGAATCCACCCTCCATCTGGTCTTGCGTCTGCGTGGTGGAA 140720 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || ||||| | |||||| | || | ||| || | Sbjct 140264 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCC 140323 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || |||||| ||||| ||||| || || || ||||| Sbjct 140324 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140383 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | | |||||| ||| | ||||||| | | | | | |||||||||| Sbjct 140384 CAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140443 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||||| || ||||| || |||||||||||||| Sbjct 140444 ATTCAGAAGGAATCCACCCTCCATCTGGTCCTG 140476 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || ||||| | |||||| | || | ||| || | Sbjct 140036 ATGCAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140095 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || |||||| ||||| ||||| || || || ||||| Sbjct 140096 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140155 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | | |||||| || | ||||||| | | | | | |||||||||| Sbjct 140156 CAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140215 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||||| || ||||| || |||||||||||||| Sbjct 140216 ATTCAGAAGGAATCCACCCTCCATCTGGTCCTG 140248 >seq368 Length=285863 Score = 100 bits (110), Expect = 3e-16 Identities = 297/446 (67%), Gaps = 29/446 (7%) Strand=Plus/Minus Query 147511 ACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAG 147570 ||||||| || |||||||||||||| | ||||| || |||| || |||||||| | Sbjct 114986 ACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTCGGCATCGGTG 114927 Query 147571 CAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTA-AGCTCGTCCCAG 147629 | | || || |||||||| | |||||| | || |||| || ||| || ||| ||||| Sbjct 114926 CCAGCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTT-TCTCTTTCAGTTCGGCCCAG 114868 Query 147630 TTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTT 147689 ||||||||||| ||| || | | ||||||| || ||||||| | || || Sbjct 114867 TTCCAAAGATCCGTCGGTTCTT---TGTTCCACATGTCGTACTGTAAGATGCCTTTGCTC 114811 Query 147690 GCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGA 147749 | || || || ||||| | ||||| | |||| | || | || | | | | Sbjct 114810 ACCGGACTACCTTCGTATGTTTCGTACGGCCCGTCACGGGCGGCCAACTC-ACAGCTCG- 114753 Query 147750 CTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTT--TTATTTAAATCTCTAGCCTC 147805 ||| ||||| ||||| || || ||||| |||| ||| | ||| | | | || || Sbjct 114752 CTTCCAGTGCGCCATAGTAGATGGTTTC--AAATATTTGCTGATTCAGCTTTTGGGCTTC 114695 Query 147806 TTGGCTGTCGTAGGGCATATC----CAAAATGGCGAACGTATCCGCAAGTCCTTGAATAC 147861 || || ||||| || ||| | ||||| ||| | ||| || | || |||| || Sbjct 114694 TTCACTTTCGTATGG-ATAACGCATTAAAAT---GAATGCATCTGCCATGCCCTGAACAC 114639 Query 147862 CGATACCGATGGGTCGGTGTCTGAAATTCGATGCTTGAGCGC-TAGCCAACGGATAAAAA 147920 |||||||||| || | || | ||| | ||||| | ||| |||||| || Sbjct 114638 CGATACCGATCGGCCTATGGC-------GCATGTTAAAGCGCTTTGCCGCCGGATAGTAA 114586 Query 147921 TTCAAGTCGATAATTTTATTGAGATT 147946 || | |||||| ||||| || ||||| Sbjct 114585 TTTATGTCGATGATTTTGTTCAGATT 114560 >seq591 Length=212830 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/167 (74%), Gaps = 5/167 (3%) Strand=Plus/Minus Query 147511 ACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAG 147570 ||||||| || |||||||||||||| | ||||| || |||| || |||||||| | Sbjct 137124 ACGGCTCAAAGGACTCGTTGTTACCCAATATCTGCGCCGTCGAGGCGGTCGGCATCGGTG 137065 Query 147571 CAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTA-AGCTCGTCCCAG 147629 | | || || |||||||| | |||||| | || |||| || ||| || ||| ||||| Sbjct 137064 CCAGCAGTAGCGAATTGCGGATACCGTGCTTTGCAATTT-TCTCTTTCAGTTCGGCCCAG 137006 Query 147630 TTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAA 147676 ||||||||||| ||| || | | ||||||| || ||||||| Sbjct 137005 TTCCAAAGATCCGTCGGTTCTT---TGTTCCACATGTCGTACTGTAA 136962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478359705864800