Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq591 210 6e-49 seq368 201 3e-46 seq1559 116 1e-20 seq109 116 1e-20 >seq591 Length=212830 Score = 210 bits (232), Expect = 6e-49 Identities = 689/1060 (65%), Gaps = 13/1060 (1%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | || | ||||| ||||| || ||||| ||||| |||||||| || || Sbjct 135741 ATCAAGGGCAAAATCGCGGAACGACCGCAACACATGTTGATGCGCGTTGCTATCGGCATT 135800 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| | || | ||||| || ||||| || || || || || | || || Sbjct 135801 CATGGAGAAGACATCGATGCAGCAATTGAGACTTACAATCTACTTTCGGAGCGCTACTTT 135860 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 ||||||||| | || || |||| || | || | || ||| | || |||||| Sbjct 135861 ACGCACGCCTCACCGACCATGTTTGCGGCCGCTACGCAGCGCCCGCAGCTATCGTCTTGC 135920 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| || | ||| |||||| || |||||||||| || || | ||| | ||| Sbjct 135921 TTTCTGCTTACTATGTCGGACGACAGTATTGAGGGTATCTACGATACGTTGAAGCAGTGT 135980 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG-CA 363726 || || ||||| || || ||||| || || || || | ||| | |||| | || Sbjct 135981 GCACTGATTTCAAAATCGGCCGGCGGTATCGGGCTGAAT--GTGCACTGTATTCGCGCCA 136038 Query 363727 CAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | ||||| ||| || | ||||| ||||| ||| |||| || ||| | || Sbjct 136039 AAGGA-ACGTACATCTCCGGAACGAATGGGAT-TTCGAACGGGTTGGTGCCAATGTTGCG 136096 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 || | ||||||| || ||||||| || |||||||| || || || || || Sbjct 136097 CGTTTACAACAATACGGCACGGTACGTGGATCAGGGTGGCAACAAACGGCCCGGAGCCTT 136156 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||| || || ||||| || |||| ||||| || |||||||| || || |||||| Sbjct 136157 TGCCATCTACCTCGAACCATGGCATGGGGATATATTCGAGTTTCTGGATCTGAAGAAAAA 136216 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 || || || ||||| |||| || || ||| ||||||| || || ||| | | |||| Sbjct 136217 TACCGGCAAGGAGGAGGTGCGAGCTCGAGATATGTTCTACGCCCTGTGGATCCCGGACCT 136276 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 || |||| || |||||||| | | | ||| || | || || ||||| ||||| Sbjct 136277 GTTCATGACTCGGGTGGAGGCGAATGAAATGTGGAGCCTAATGTGTCCGCACGACTGTCC 136336 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 || || | ||| |||||||| || | | || ||| | || || ||| Sbjct 136337 CGGACTGGCTGATACCTGGGGTGAGGAGTTCGAGAAGCTGTACACTAGCTACGAGAAGGA 136396 Query 364086 GGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 ||| | | || |||| | |||| | | || |||||| | ||||| || |||| Sbjct 136397 GGG-CCGATTTATACGACAGGTGAAGGCACGGGATCTGTGGTTTTCAATCATTGAGTCGC 136455 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 || | || ||||| || || || ||||||| || | || ||||| ||| ||| | Sbjct 136456 AGGTGGAAACAGGTGTGCCGTACATACTGTACAAGGACGCATGTAACCGTAAGAGCAATC 136515 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCG 364264 ||||| || |||| || || || || || |||||||| ||| | || ||| | Sbjct 136516 AGCAGAACATTGGCACCATCAAGTGTTCTAATCTTTGTACCGAAATTGTGGAGTACTCGT 136575 Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-- 364322 | || || || || ||||| || || ||||||||| | |||||| || Sbjct 136576 CGAAAGATGAAGTAGCGGTGTGTAATCTGGCCTCGATCGCGTTGAACATGTTTGTGAAGC 136635 Query 364323 -AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATC 364381 ||| || | ||| | || | ||||| || || || |||||| Sbjct 136636 CAGACAAAACGTACGACTTTGCAAAGCTGAAGGACGTCGCCAGGATTGTGACGCGCAATC 136695 Query 364382 TCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGC 364441 | |||| | ||||||| ||||| ||||| | || || || |||| ||||| |||| Sbjct 136696 TGAACAAAATCATCGACATAAATTACTATCCCGTACCGGAGGCAAAGCGCTCTAACATGC 136755 Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481 | ||| | ||||| ||| ||||||| |||||| | || || Sbjct 136756 GCCATAGGCCGATCGGTATTGGTGTTCAGGGCATGGCAGA 136795 >seq368 Length=285863 Score = 201 bits (222), Expect = 3e-46 Identities = 579/881 (66%), Gaps = 10/881 (1%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | || | ||||| ||||| || ||||| ||||| |||||||| || || Sbjct 113609 ATCAAGGGCAAAATCGCGGAACGACCGCAACACATGTTGATGCGCGTTGCTATCGGCATT 113668 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| | || | ||||| || ||||| || || || || || | || || Sbjct 113669 CATGGAGAAGACATCGATGCAGCAATTGAGACTTACAATCTACTTTCGGAGCGCTACTTT 113728 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 ||||||||| | || || |||| || | || | || ||| | || |||||| Sbjct 113729 ACGCACGCCTCACCGACCATGTTTGCGGCCGCTACGCAGCGCCCGCAGCTATCGTCTTGC 113788 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| || | ||| |||||| || |||||||||| ||||| | ||| | ||| Sbjct 113789 TTTCTGCTTACTATGTCGGACGACAGTATTGAGGGTATCTACGACACGTTGAAGCAGTGT 113848 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG-CA 363726 || || ||||| || || ||||| || || || || | ||| | |||| | || Sbjct 113849 GCACTGATTTCAAAATCGGCCGGCGGTATCGGGCTGAAT--GTGCACTGTATTCGCGCCA 113906 Query 363727 CAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | ||||| ||| || | ||||| ||||| ||| |||| || ||||| || Sbjct 113907 AAGGA-ACGTACATCTCCGGAACGAATGGGAT-TTCGAACGGGTTGGTGCCAATGCTGCG 113964 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 || | ||||||| || ||||||| || |||||||| || || || || || Sbjct 113965 CGTTTACAACAATACGGCACGGTACGTGGATCAGGGTGGCAACAAACGGCCCGGAGCCTT 114024 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||| || || ||||| || |||| ||||| || |||||||| || || |||||| Sbjct 114025 TGCCATCTACCTCGAACCATGGCATGGGGATATATTCGAGTTTCTGGATCTGAAGAAAAA 114084 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 || || || ||||| |||| ||||| || ||||||| || || ||| | | |||| Sbjct 114085 TACCGGCAAGGAGGAGGTGCGAGCACGAGACATGTTCTACGCCCTGTGGATCCCGGACCT 114144 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 || |||| || |||||||| | | | ||| || | ||||| ||||| ||||| Sbjct 114145 GTTCATGACTCGGGTGGAGGCGAATGAAATGTGGAGCCTAATGTGCCCGCACGACTGTCC 114204 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 || || | ||| |||||||| || | | || ||| | || || ||| Sbjct 114205 TGGACTGGCTGATACCTGGGGTGAGGAGTTCGAGAAGCTGTACACTAGCTACGAGAAGGA 114264 Query 364086 GGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 ||| | | || |||| | |||| | | || |||||| | ||||| || |||| Sbjct 114265 GGG-CCGATTTATACGACAGGTGAAGGCACGGGATCTGTGGTTTTCAATCATTGAGTCGC 114323 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 || | || ||||| || || || ||||||| || | || ||||| ||| ||| | Sbjct 114324 AGGTGGAAACAGGTGTGCCGTACATACTGTACAAGGACGCATGTAACCGTAAGAGCAATC 114383 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCG 364264 ||||| || |||| || || || || || |||||||| ||| | || ||| | Sbjct 114384 AGCAGAACATTGGCACCATCAAGTGTTCTAATCTTTGTACCGAAATTGTGGAGTACTCGT 114443 Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCG 364305 | || || || || ||||| || || ||||||||| Sbjct 114444 CGAAAGATGAAGTAGCGGTGTGTAATCTGGCCTCGATCGCG 114484 >seq1559 Length=79761 Score = 116 bits (128), Expect = 1e-20 Identities = 237/343 (69%), Gaps = 18/343 (5%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| || ||||| || ||||| ||||| ||||| |||||||||||| |||||||| Sbjct 23312 AGGTGACCTAGGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAAC 23253 Query 111548 CATG-CACGACTCATATGATT-CACAGGGAACTGA-----TCAATTACAGAATGTCATTG 111600 ||| |||||| |||| ||| ||||| || ||| || || || || | Sbjct 23252 -ATGTCACGAC------GATTACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCG 23200 Query 111601 ATCAAATT-AAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAAT 111659 | || ||| || ||||| || |||||| || |||||||| || ||||| || Sbjct 23199 A-CACATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCGCTTGGAATCCTTCC 23141 Query 111660 G-CATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGA 111718 | |||| || | |||| || || || || || | || ||||||| || || Sbjct 23140 GACATTCCCAACA-TGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTTGCTGA 23082 Query 111719 CGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTT 111778 || ||| || |||||||||||||||||||| || ||| |||| | || || ||||| Sbjct 23081 TGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTT 23022 Query 111779 TAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 || ||||| || ||| |||| || || | | ||||| ||| Sbjct 23021 CAACATTGCCAGCTACTCACTGCTGACCCACATGATCGCGCAT 22979 >seq109 Length=460762 Score = 116 bits (128), Expect = 1e-20 Identities = 237/343 (69%), Gaps = 18/343 (5%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| || ||||| || ||||| ||||| ||||| |||||||||||| |||||||| Sbjct 284130 AGGTGACCTAGGACCGGTGTACGGTTTTCAGTGGCGTCACTTTGGTGCAACGTACAAAAC 284189 Query 111548 CATG-CACGACTCATATGATT-CACAGGGAACTGA-----TCAATTACAGAATGTCATTG 111600 ||| |||||| |||| ||| ||||| || ||| || || || || | Sbjct 284190 -ATGTCACGAC------GATTACACGGGGAAAGGAATCGATCAGTTGGCAAAGGTGATCG 284242 Query 111601 ATCAAATT-AAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAAT 111659 | || ||| || ||||| || |||||| || |||||||| || ||||| || Sbjct 284243 A-CACATTGAAAAACAATCCTTACGATCGTCGGATCATTATGAGCGCTTGGAATCCTTCC 284301 Query 111660 G-CATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGA 111718 | |||| || | |||| || || || || || | || ||||||| || || Sbjct 284302 GACATTCCCAACA-TGGCCCTGCCGCCGTGCCACTGTTTGGCACAGTTTTTCGTTGCTGA 284360 Query 111719 CGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTT 111778 || ||| || |||||||||||||||||||| || ||| |||| | || || ||||| Sbjct 284361 TGGAGAGCTGTCCTGCCAAATGTATCAGCGATCGGCCGATGTTGGCTTGGGCGTACCGTT 284420 Query 111779 TAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 || ||||| || ||| |||| || || | | ||||| ||| Sbjct 284421 CAACATTGCCAGCTACTCACTGCTGACCCACATGATCGCGCAT 284463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302508786561380