Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq561 96.9 3e-15
>seq561
Length=219668
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|||||||||| | ||||| || || | || ||||| | || ||| | || ||||| |
Sbjct 139804 CAAAATGCAAATCTTTGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACC 139863
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|||||| |||||| | || || |||||| ||||| ||||| || || || ||
Sbjct 139864 ATCCGACACAATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGA 139923
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| ||| | ||||| | | ||||||||| | ||||||| | | | | ||| ||
Sbjct 139924 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTA 139983
Query 24167 TAACATTCAAAAAGAATCTAC 24187
||||||||| || ||||| ||
Sbjct 139984 TAACATTCAGAAGGAATCCAC 140004
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || ||||| | || ||| | || ||||| | |
Sbjct 140264 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCC 140323
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || |||||| ||||| ||||| || || || |||||
Sbjct 140324 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140383
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | | |||||||||| | ||||||| | | | | ||| ||||||
Sbjct 140384 CAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140443
Query 24171 ATTCAAAAAGAATCTAC 24187
||||| || ||||| ||
Sbjct 140444 ATTCAGAAGGAATCCAC 140460
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || ||||| | || ||| | || ||||| | |
Sbjct 140036 ATGCAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140095
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || |||||| ||||| ||||| || || || |||||
Sbjct 140096 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 140155
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | | ||||||||| | ||||||| | | | | ||| ||||||
Sbjct 140156 CAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140215
Query 24171 ATTCAAAAAGAATCTAC 24187
||||| || ||||| ||
Sbjct 140216 ATTCAGAAGGAATCCAC 140232
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || ||| | || ||||| | || ||| | || ||||| | |
Sbjct 140492 ATGCAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140551
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | || || |||||| ||||| ||||| || || || |||||
Sbjct 140552 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATCCCCCCAGATCAG 140611
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | || || | | ||||||||| | ||||||| | | | | ||| ||||||
Sbjct 140612 CAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAAC 140671
Query 24171 ATTCAAAAAGAATCTAC 24187
||||| || ||||| ||
Sbjct 140672 ATTCAGAAGGAATCCAC 140688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429670916241450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |