Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq561 131 1e-25 seq2250 118 9e-22 >seq561 Length=219668 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| |||||| ||||||| || ||||||| | || || || | || Sbjct 139807 AATGCAAATCTTTGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATC 139866 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| |||||| ||||| | || | ||| ||||| ||||| || || || || | Sbjct 139867 CGACACAATCGAGAATGTGAAGGCCAAGATTCAG-GACAAGGAAGGAATCCCCCCGGATC 139925 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || ||||||||||| || || ||||||| |||||| || ||| || | Sbjct 139926 AGCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATA 139985 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || |||||||| || ||| | || || Sbjct 139986 ACATTCAGAAGGAATCCACCCTCCATCTGGTCCT 140019 Score = 125 bits (138), Expect = 6e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| ||||||| || ||||||| | || || || | || Sbjct 140264 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTGGAGGTCGAACCATCC 140323 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| ||||| | || | ||| ||||| ||||| || || || || || Sbjct 140324 GACACCATCGAGAATGTGAAGGCCAAGATTCAG-GACAAGGAAGGAATCCCCCCGGATCA 140382 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| ||||| ||||||| |||||| || ||| || || Sbjct 140383 GCAGCGTCTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACCCTGTCCGACTATAA 140442 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || |||||||| || ||| | || || Sbjct 140443 CATTCAGAAGGAATCCACCCTCCATCTGGTCCT 140475 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||| || ||||||| | || || || | || Sbjct 140036 ATGCAGATCTTCGTCAAGACGCTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140095 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| ||||| | || | ||| ||||| ||||| || || || || || Sbjct 140096 GACACCATCGAGAATGTGAAGGCCAAGATTCAG-GACAAGGAAGGAATCCCCCCGGATCA 140154 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || || ||||||| |||||| || ||| || || Sbjct 140155 GCAGCGTCTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAA 140214 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || |||||||| || ||| | || || Sbjct 140215 CATTCAGAAGGAATCCACCCTCCATCTGGTCCT 140247 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||| || ||||||| | || || || | || Sbjct 140492 ATGCAGATCTTCGTCAAGACACTGACCGGAAAGACCATCACCCTTGAGGTCGAACCATCC 140551 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| ||||| | || | ||| ||||| ||||| || || || || || Sbjct 140552 GACACCATCGAGAATGTGAAGGCCAAGATTCAG-GACAAGGAAGGAATCCCCCCAGATCA 140610 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || || ||||||| |||||| || ||| || || Sbjct 140611 GCAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTATAA 140670 Query 25178 TATTCAAAAAGAATCCACGCTACAT 25202 ||||| || |||||||| || ||| Sbjct 140671 CATTCAGAAGGAATCCACCCTCCAT 140695 >seq2250 Length=42400 Score = 118 bits (130), Expect = 9e-22 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050 || ||| ||||| || || || || || | || || || |||||||| |||| || | Sbjct 16830 ACAGAATCATGCAGATTTTCGTGAAAACACTCACGGGCAAGACCATCACACTCGAGGTCG 16889 Query 25051 AGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 || | || ||||| |||||| |||| || ||| || || ||||| ||||| | Sbjct 16890 AGCCATCGGACACGATCGAGAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTC 16949 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 | || || ||||| | || ||||||||||| || | ||||||| |||||| || || Sbjct 16950 CAGATCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCG 17009 Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| ||||| || |||||||| || ||| | ||||| Sbjct 17010 ACTACAACATTCAGAAGGAATCCACCCTTCATCTGGTGCT 17049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433060824850850