Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq561 120 3e-22 seq2250 107 2e-18 seq98 98.7 8e-16 >seq561 Length=219668 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | ||| | || ||||| || |||||||| || ||| Sbjct 140493 ATGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCG 140434 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| |||||| | ||| || || || |||| |||||||| || ||||| Sbjct 140433 GACAGGGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGG 140374 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| |||||| || | | || | |||||||| | |||| Sbjct 140373 GGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTTCG 140314 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || || ||||||||||| || || || ||||||||| Sbjct 140313 ACCTCCAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATCTGCATG 140263 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 |||| || ||||| || | ||| || | ||| | || ||||| || |||||||| || | Sbjct 140723 AAATTCCACCACGCAGACGCAAGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGT 140664 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 || || || ||| |||||| | || || || || ||||||||||||| || || | Sbjct 140663 CGGACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTG 140604 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 | || || ||||| ||||| |||||| || | | || | |||||||| | || Sbjct 140603 GGGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCGGATGGTT 140544 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||| || | ||| | || || |||||||| || || || || ||||||||| Sbjct 140543 CGACCTCAAGGGTGATGGTCTTTCCGGTCAGTGTCTTGACGAAGATCTGCATG 140491 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | ||| | || ||||| || |||||||| || ||| Sbjct 140037 ATGCCACCACGCAGACGCAGGACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCG 139978 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| |||||| | || || || || |||| |||||||| || ||||| Sbjct 139977 GACAGGGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGG 139918 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| |||||| || | | || | ||||||| | |||| Sbjct 139917 GGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATTGTGTCGGATGGTTCG 139858 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||||||||| || ||||| || ||||| Sbjct 139857 ACCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACAAAGATTTGCAT 139808 >seq2250 Length=42400 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || || |||| || || | ||| | || ||||| || ||||||||||| ||| Sbjct 17065 ACCACCGCGGAGTCGCAGCACCAGATGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGA 17006 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || || ||| |||||| || || || || || ||||||||||||| || || ||||| Sbjct 17005 CAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 16946 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| ||| | | || | ||||| | | ||||| Sbjct 16945 AATTCCTTCCTTATCCTGGATCTTGGCTTTCACATTCTCGATCGTGTCCGATGGCTCGAC 16886 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | || ||||| || || ||||| || |||||||||||| Sbjct 16885 CTCGAGTGTGATGGTCTTGCCCGTGAGTGTTTTCACGAAAATCTGCATG 16837 >seq98 Length=483913 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || |||| | ||| || || | || || || || ||||||||||| ||| | Sbjct 465634 CCCCCGCGAAGTCGAAGAACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 465575 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| ||| ||||| || || || ||| |||| | |||||| || || |||||| Sbjct 465574 AGAGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 465515 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| ||||| || | | || | ||||| | || ||||| Sbjct 465514 ATACCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGAGGGCTCGACC 465455 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || ||||| ||||| || || || || |||||||| Sbjct 465454 TCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 465408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419875359571080